njtierney / naniar

Tidy data structures, summaries, and visualisations for missing data
http://naniar.njtierney.com/
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soft deprecate miss_case_cumsum and miss_var_cumsum; resolves #257 #333

Closed njtierney closed 1 year ago

njtierney commented 1 year ago

Description

soft deprecate miss_case_cumsum and miss_var_cumsum

Related Issue

resolves #257

Example

library(naniar)
miss_var_cumsum(airquality)
#> Warning: `miss_var_cumsum()` was deprecated in naniar 1.1.0.
#> ℹ Please use `miss_var_summary(data, add_cumsum = TRUE)`
#> This warning is displayed once every 8 hours.
#> Call `lifecycle::last_lifecycle_warnings()` to see where this warning was
#> generated.
#> # A tibble: 6 × 3
#>   variable n_miss n_miss_cumsum
#>   <chr>     <int>         <int>
#> 1 Ozone        37            37
#> 2 Solar.R       7            44
#> 3 Wind          0            44
#> 4 Temp          0            44
#> 5 Month         0            44
#> 6 Day           0            44
miss_var_summary(airquality, add_cumsum = TRUE)
#> # A tibble: 6 × 4
#>   variable n_miss pct_miss n_miss_cumsum
#>   <chr>     <int>    <num>         <int>
#> 1 Ozone        37    24.2             37
#> 2 Solar.R       7     4.58            44
#> 3 Wind          0     0               44
#> 4 Temp          0     0               44
#> 5 Month         0     0               44
#> 6 Day           0     0               44

miss_case_cumsum(airquality)
#> Warning: `miss_case_cumsum()` was deprecated in naniar 1.1.0.
#> ℹ Please use `miss_var_summary(data, add_cumsum = TRUE)`
#> This warning is displayed once every 8 hours.
#> Call `lifecycle::last_lifecycle_warnings()` to see where this warning was
#> generated.
#> # A tibble: 153 × 3
#>     case n_miss n_miss_cumsum
#>    <int>  <int>         <int>
#>  1     1      0             0
#>  2     2      0             0
#>  3     3      0             0
#>  4     4      0             0
#>  5     5      2             2
#>  6     6      1             3
#>  7     7      0             3
#>  8     8      0             3
#>  9     9      0             3
#> 10    10      1             4
#> # ℹ 143 more rows
miss_case_summary(airquality, add_cumsum = TRUE)
#> # A tibble: 153 × 4
#>     case n_miss pct_miss n_miss_cumsum
#>    <int>  <int>    <dbl>         <int>
#>  1     5      2     33.3             2
#>  2    27      2     33.3             9
#>  3     6      1     16.7             3
#>  4    10      1     16.7             4
#>  5    11      1     16.7             5
#>  6    25      1     16.7             6
#>  7    26      1     16.7             7
#>  8    32      1     16.7            10
#>  9    33      1     16.7            11
#> 10    34      1     16.7            12
#> # ℹ 143 more rows

Created on 2023-05-02 with reprex v2.0.2

Session info ``` r sessioninfo::session_info() #> ─ Session info ─────────────────────────────────────────────────────────────── #> setting value #> version R version 4.3.0 (2023-04-21) #> os macOS Ventura 13.2 #> system aarch64, darwin20 #> ui X11 #> language (EN) #> collate en_US.UTF-8 #> ctype en_US.UTF-8 #> tz America/Los_Angeles #> date 2023-05-02 #> pandoc 2.19.2 @ /Applications/RStudio.app/Contents/Resources/app/quarto/bin/tools/ (via rmarkdown) #> #> ─ Packages ─────────────────────────────────────────────────────────────────── #> package * version date (UTC) lib source #> cli 3.6.1 2023-03-23 [1] CRAN (R 4.3.0) #> colorspace 2.1-0 2023-01-23 [1] CRAN (R 4.3.0) #> crayon 1.5.2 2022-09-29 [1] CRAN (R 4.3.0) #> digest 0.6.31 2022-12-11 [1] CRAN (R 4.3.0) #> dplyr 1.1.2 2023-04-20 [1] CRAN (R 4.3.0) #> evaluate 0.20 2023-01-17 [1] CRAN (R 4.3.0) #> fansi 1.0.4 2023-01-22 [1] CRAN (R 4.3.0) #> fastmap 1.1.1 2023-02-24 [1] CRAN (R 4.3.0) #> fs 1.6.2 2023-04-25 [1] CRAN (R 4.3.0) #> generics 0.1.3 2022-07-05 [1] CRAN (R 4.3.0) #> ggplot2 3.4.2 2023-04-03 [1] CRAN (R 4.3.0) #> glue 1.6.2 2022-02-24 [1] CRAN (R 4.3.0) #> gtable 0.3.3 2023-03-21 [1] CRAN (R 4.3.0) #> htmltools 0.5.5 2023-03-23 [1] CRAN (R 4.3.0) #> knitr 1.42 2023-01-25 [1] CRAN (R 4.3.0) #> lifecycle 1.0.3 2022-10-07 [1] CRAN (R 4.3.0) #> magrittr 2.0.3 2022-03-30 [1] CRAN (R 4.3.0) #> munsell 0.5.0 2018-06-12 [1] CRAN (R 4.3.0) #> naniar * 1.0.0.9000 2023-05-02 [1] local #> pillar 1.9.0 2023-03-22 [1] CRAN (R 4.3.0) #> pkgconfig 2.0.3 2019-09-22 [1] CRAN (R 4.3.0) #> purrr 1.0.1 2023-01-10 [1] CRAN (R 4.3.0) #> R.cache 0.16.0 2022-07-21 [1] CRAN (R 4.3.0) #> R.methodsS3 1.8.2 2022-06-13 [1] CRAN (R 4.3.0) #> R.oo 1.25.0 2022-06-12 [1] CRAN (R 4.3.0) #> R.utils 2.12.2 2022-11-11 [1] CRAN (R 4.3.0) #> R6 2.5.1 2021-08-19 [1] CRAN (R 4.3.0) #> reprex 2.0.2 2022-08-17 [1] CRAN (R 4.3.0) #> rlang 1.1.0 2023-03-14 [1] CRAN (R 4.3.0) #> rmarkdown 2.21 2023-03-26 [1] CRAN (R 4.3.0) #> rstudioapi 0.14 2022-08-22 [1] CRAN (R 4.3.0) #> scales 1.2.1 2022-08-20 [1] CRAN (R 4.3.0) #> sessioninfo 1.2.2 2021-12-06 [1] CRAN (R 4.3.0) #> styler 1.9.1 2023-03-04 [1] CRAN (R 4.3.0) #> tibble 3.2.1 2023-03-20 [1] CRAN (R 4.3.0) #> tidyr 1.3.0 2023-01-24 [1] CRAN (R 4.3.0) #> tidyselect 1.2.0 2022-10-10 [1] CRAN (R 4.3.0) #> utf8 1.2.3 2023-01-31 [1] CRAN (R 4.3.0) #> vctrs 0.6.2 2023-04-19 [1] CRAN (R 4.3.0) #> visdat 0.6.0 2023-02-02 [1] CRAN (R 4.3.0) #> withr 2.5.0 2022-03-03 [1] CRAN (R 4.3.0) #> xfun 0.39 2023-04-20 [1] CRAN (R 4.3.0) #> yaml 2.3.7 2023-01-23 [1] CRAN (R 4.3.0) #> #> [1] /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library #> #> ────────────────────────────────────────────────────────────────────────────── ```

Tests

Yes

NEWS + DESCRIPTION

Yes