sverhoeven
commented
6 years ago The gff3.as file can be downloaded from https://github.com/nlesc-ave/ave-rest-service/blob/master/gff3.as or is available inside Docker container at /app/gff3.as
Closed EdwinvZon closed 6 years ago
sverhoeven
commented
6 years ago The gff3.as file can be downloaded from https://github.com/nlesc-ave/ave-rest-service/blob/master/gff3.as or is available inside Docker container at /app/gff3.as
Dear reader, thanks for the docker image and the new documentation it is looking very well. However I still run into a problem, running the folliwing; root@9d44780e8968:/data# bedToBigBed -tab -type=bed6+4 -as=gff3.as genes.sorted.bed chrom.sizes genes.sorted.bb This gives me the following error: mustOpen: Can't open gff3.as to read: No such file or directory Do you have an idea what might be the problem?
Kind regards,
Edwin van Zon