Linux crash with focei-wang2007 test

[billdenney]

While running testing with current main branch, I get the following error:

⠸ | 1     203 | focei-wang2007
malloc(): unsorted double linked list corrupted
Aborted (core dumped)

[mattfidler]

Can you run in a terminal as follows:

R -d gdb

Once the console comes up, you can use r

It should give you something like this:

matt@pop-os:~$ R -d gdb
GNU gdb (Ubuntu 11.1-0ubuntu2) 11.1
Copyright (C) 2021 Free Software Foundation, Inc.
License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>
This is free software: you are free to change and redistribute it.
There is NO WARRANTY, to the extent permitted by law.
Type "show copying" and "show warranty" for details.
This GDB was configured as "x86_64-linux-gnu".
Type "show configuration" for configuration details.
For bug reporting instructions, please see:
<https://www.gnu.org/software/gdb/bugs/>.
Find the GDB manual and other documentation resources online at:
    <http://www.gnu.org/software/gdb/documentation/>.

For help, type "help".
Type "apropos word" to search for commands related to "word"...
Reading symbols from /usr/lib/R/bin/exec/R...
(No debugging symbols found in /usr/lib/R/bin/exec/R)
(gdb) r
Starting program: /usr/lib/R/bin/exec/R 
[Thread debugging using libthread_db enabled]
Using host libthread_db library "/usr/lib/x86_64-linux-gnu/libthread_db.so.1".

R version 4.1.0 (2021-05-18) -- "Camp Pontanezen"
fCopyright (C) 2021 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

  Natural language support but running in an English locale

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

[Detaching after vfork from child process 105580]
[Detaching after vfork from child process 105582]
>

Run the same test when it errors it will exit back in the (gdb) prompt. When there if you type bt it may give some information I can use to help.

[billdenney]

Here ya go. It seems to have happened at a different location this time.

─────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
✖ | 2       0 | issue-164 [0.5s]
─────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
Failure (test-issue-164.R:28:3): add/prop have appropriate errors
f$ini$lower (`actual`) not equal to c(-Inf, -Inf, -Inf, -Inf, -Inf, -Inf, 0, 0) (`expected`).

  `actual[4:8]`: -Inf -Inf -Inf -Inf -Inf
`expected[4:8]`: -Inf -Inf -Inf    0    0

Error (test-issue-164.R:51:3): add/prop have appropriate errors
Error in `if (num_equal(x, y, tolerance)) {
    return(new_compare())
}`: missing value where TRUE/FALSE needed
Backtrace:
 1. testthat::expect_equal(...)
      at test-issue-164.R:51:2
 2. testthat:::expect_waldo_equal("equal", act, exp, info, ..., tolerance = tolerance)
 3. testthat:::waldo_compare(...)
 4. waldo::compare(x, y, ..., x_arg = x_arg, y_arg = y_arg)
 5. waldo:::compare_structure(x, y, paths = c(x_arg, y_arg), opts = opts)
 6. waldo:::compare_numeric(...)
─────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
⠋ |         1 | issue-169                                                                                                                            [Detaching after fork from child process 651338]

Thread 1 "R" received signal SIGSEGV, Segmentation fault.
tcache_get (tc_idx=<optimized out>) at malloc.c:2937
2937    malloc.c: No such file or directory.
(gdb) bt
#0  tcache_get (tc_idx=<optimized out>) at malloc.c:2937
nlmixr2/nlmixr2#1  __GI___libc_malloc (bytes=968) at malloc.c:3051
nlmixr2/nlmixr2#2  0x00007ffff7c8ca74 in Rf_allocVector3 () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#3  0x00007ffff7ba6868 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#4  0x00007ffff7ba6cee in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#5  0x00007ffff7c30ba1 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#6  0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#7  0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#8  0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#9  0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#10 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#11 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#12 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#13 0x00007ffff7c51029 in R_forceAndCall () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#14 0x00007ffff7b7a277 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#15 0x00007ffff7c9022f in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#16 0x00007ffff7c30991 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#17 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#18 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#19 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#20 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#21 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#22 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#23 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#24 0x00007ffff7c51029 in R_forceAndCall () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#25 0x00007ffff7b7a277 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#26 0x00007ffff7c9022f in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#27 0x00007ffff7c30991 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#28 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#29 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#30 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
nlmixr2/rxode2#7 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#32 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#33 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#34 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#35 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#36 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#37 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#38 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#39 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#40 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#41 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#42 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#43 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#44 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#45 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#46 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#47 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#48 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#49 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#50 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#51 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#52 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#53 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#54 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#55 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#56 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#57 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#58 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#59 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#60 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#61 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#62 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#63 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#64 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#65 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#66 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#67 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#68 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#69 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#70 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#71 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#72 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#73 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#74 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#75 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#76 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#77 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#78 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#79 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#80 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#81 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#82 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#83 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#84 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#85 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#86 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#87 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#88 0x00007ffff7c4d501 in ?? () from /usr/lib/R/lib/libR.so
#89 0x00007ffff7c4d9c4 in ?? () from /usr/lib/R/lib/libR.so
#90 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#91 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#92 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#93 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#94 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#95 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#96 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#97 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#98 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#99 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#100 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#101 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#102 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#103 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#104 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#105 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#106 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#107 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#108 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#109 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#110 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#111 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#112 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#113 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#114 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#115 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#116 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#117 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#118 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#119 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#120 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#121 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#122 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#123 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#124 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#125 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#126 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#127 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#128 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#129 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#130 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#131 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#132 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#133 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#134 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#135 0x00007ffff7c924f4 in ?? () from /usr/lib/R/lib/libR.so
#136 0x00007ffff7c92930 in ?? () from /usr/lib/R/lib/libR.so
#137 0x00007ffff7c92cf7 in ?? () from /usr/lib/R/lib/libR.so
#138 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#139 0x00007ffff7c4f4f3 in ?? () from /usr/lib/R/lib/libR.so
#140 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#141 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#142 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#143 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#144 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#145 0x00007ffff7c4bc5f in Rf_eval () from /usr/lib/R/lib/libR.so
#146 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#147 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#148 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#149 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#150 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#151 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#152 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#153 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#154 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#155 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#156 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#157 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#158 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#159 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#160 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#161 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#162 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#163 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#164 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#165 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#166 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#167 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#168 0x00007ffff7c50ab2 in ?? () from /usr/lib/R/lib/libR.so
#169 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#170 0x00007ffff7c4f4f3 in ?? () from /usr/lib/R/lib/libR.so
#171 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#172 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#173 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#174 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#175 0x00007ffff7c50ab2 in ?? () from /usr/lib/R/lib/libR.so
#176 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#177 0x00007ffff7c4f4f3 in ?? () from /usr/lib/R/lib/libR.so
#178 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#179 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#180 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#181 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#182 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#183 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#184 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#185 0x00007ffff7c924f4 in ?? () from /usr/lib/R/lib/libR.so
#186 0x00007ffff7c92930 in ?? () from /usr/lib/R/lib/libR.so
#187 0x00007ffff7c92cf7 in ?? () from /usr/lib/R/lib/libR.so
#188 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#189 0x00007ffff7c4f4f3 in ?? () from /usr/lib/R/lib/libR.so
#190 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#191 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#192 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#193 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#194 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#195 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#196 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#197 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#198 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#199 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#200 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#201 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#202 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#203 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#204 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#205 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#206 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#207 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#208 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#209 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#210 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#211 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#212 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#213 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#214 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#215 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#216 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#217 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#218 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#219 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#220 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#221 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#222 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#223 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#224 0x00007ffff7c50ab2 in ?? () from /usr/lib/R/lib/libR.so
#225 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#226 0x00007ffff7c4f4f3 in ?? () from /usr/lib/R/lib/libR.so
#227 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#228 0x00007ffff7c51af2 in ?? () from /usr/lib/R/lib/libR.so
#229 0x00007ffff7c30ba1 in ?? () from /usr/lib/R/lib/libR.so
#230 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#231 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#232 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#233 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#234 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#235 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#236 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#237 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#238 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#239 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#240 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#241 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#242 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#243 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#244 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#245 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#246 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#247 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#248 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#249 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#250 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#251 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#252 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#253 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#254 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#255 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#256 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#257 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#258 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#259 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#260 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#261 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#262 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#263 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#264 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#265 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#266 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#267 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#268 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#269 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#270 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#271 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#272 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#273 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#274 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#275 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#276 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#277 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#278 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#279 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#280 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#281 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#282 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#283 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#284 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#285 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#286 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#287 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#288 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#289 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#290 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#291 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#292 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#293 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#294 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#295 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#296 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#297 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#298 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#299 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#300 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#301 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#302 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#303 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#304 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#305 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#306 0x00007ffff7c52056 in ?? () from /usr/lib/R/lib/libR.so
#307 0x00007ffff7c30ba1 in ?? () from /usr/lib/R/lib/libR.so
#308 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#309 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#310 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#311 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#312 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#313 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#314 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#315 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#316 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#317 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#318 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#319 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#320 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#321 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#322 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#323 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#324 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#325 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#326 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#327 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#328 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#329 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#330 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#331 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#332 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#333 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#334 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#335 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#336 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#337 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#338 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#339 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#340 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#341 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#342 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#343 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#344 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#345 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#346 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#347 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#348 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#349 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#350 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#351 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#352 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#353 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#354 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#355 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#356 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#357 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#358 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#359 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#360 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#361 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#362 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#363 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#364 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#365 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#366 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#367 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#368 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#369 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#370 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#371 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#372 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#373 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#374 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#375 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#376 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#377 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#378 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#379 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#380 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#381 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#382 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#383 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#384 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#385 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#386 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#387 0x00007ffff7c51029 in R_forceAndCall () from /usr/lib/R/lib/libR.so
#388 0x00007ffff7b7a277 in ?? () from /usr/lib/R/lib/libR.so
#389 0x00007ffff7c9022f in ?? () from /usr/lib/R/lib/libR.so
#390 0x00007ffff7c30991 in ?? () from /usr/lib/R/lib/libR.so
#391 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#392 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#393 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#394 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#395 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#396 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#397 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#398 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#399 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#400 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#401 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#402 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#403 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#404 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#405 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#406 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#407 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#408 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#409 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#410 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#411 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#412 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#413 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#414 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#415 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#416 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#417 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#418 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#419 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#420 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#421 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#422 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#423 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#424 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#425 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#426 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#427 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#428 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#429 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#430 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#431 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#432 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#433 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#434 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#435 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#436 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#437 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#438 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#439 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#440 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#441 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#442 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#443 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#444 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#445 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#446 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#447 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#448 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#449 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#450 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#451 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#452 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#453 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#454 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#455 0x00007ffff7c7fe62 in Rf_ReplIteration () from /usr/lib/R/lib/libR.so
#456 0x00007ffff7c80200 in ?? () from /usr/lib/R/lib/libR.so
#457 0x00007ffff7c802c0 in run_Rmainloop () from /usr/lib/R/lib/libR.so
#458 0x000055555555509f in main ()
#459 0x00007ffff79290b3 in __libc_start_main (main=0x555555555080 <main>, argc=3, argv=0x7fffffffe3d8, init=<optimized out>, fini=<optimized out>, rtld_fini=<optimized out>, stack_end=0x7fffffffe3c8) at ../csu/libc-start.c:308
#460 0x00005555555550de in _start ()
(gdb)

[mattfidler]

Unfortunately that backtrace isn't terribly useful. Also unfortunately the solve works for me. I guess I need to up the optimization level and look ad some of these valgrind types of errors.

[billdenney]

I still have the terminal open in case I can give more info that would help. (Based on your comment, I don't think that there is more info that would help, but better to ask than lose the info.)

[mattfidler]

No. You need to compile nlmixr2 and rxode2 with debugging symbols for a useful backtrace.

On Fri, Jan 28, 2022, 12:49 PM Bill Denney @.***> wrote:

I still have the terminal open in case I can give more info that would help. (Based on your comment, I don't think that there is more info that would help, but better to ask than lose the info.)

— Reply to this email directly, view it on GitHub https://github.com/nlmixr2/nlmixr2/issues/47#issuecomment-1024510372, or unsubscribe https://github.com/notifications/unsubscribe-auth/AAD5VWQICHD2DVVSK5GW2FTUYLQLDANCNFSM5NBBT5XA . Triage notifications on the go with GitHub Mobile for iOS https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675 or Android https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub.

You are receiving this because you commented.Message ID: @.***>

[billdenney]

How do I do that? I can recompile and retry to see if I can replicate and give more info.

[mattfidler]

I will write intructions once I have internet outside my phone

[mattfidler]

You modify the ~/R/Makevars as follows:

CFLAGS=-g -O0 -Wall -pedantic
CXXFLAGS=-g -O0 -Wall -pedantic
CXX14FLAGS=-g -O0 -Wall -pedantic
FFLAGS = -g -O0 -Wall -pedantic

You can choose -O2 instead of -O0 too.

[billdenney]

I think that this would be handy to put into documentation on reporting bugs, so I'm starting with all the steps I took to get this ready:

1. Checkout the current development branch from github.
2. Setup R to compile with debugging symbols (note the ~/R/Makevars file change above).
3. In the main rxode2 directory, ensure that you're working from a clean copy (with no precompiled components). This command will remove any changes that you've made, so if you have edited a file and want to save the changes, save them first: git clean -fdx.
4. Install rxode2 (R, devtools::install_local(force=TRUE))
5. Do steps 1 to 4 for nlmxir2
6. Run R with debugging: R -d gdb then type r at the prompt.
7. Try to replicate your problem.
8. Run the same test when it errors it will exit back in the (gdb) prompt. When there if you type bt, and it may give some information to help diagnose the problem.

[mattfidler]

That's fine @billdenney.

This only works on linux though. Windows doesn't have a way (yet) and the way to debug on a mac is slightly different (and involves elevating privileges).

[billdenney]

With debugging. FYI, I used -O2.

[Detaching after fork from child process 675169]
⠋ | 1     260 | focei-wang2007                                                                                                                                                                  [Detaching after fork from child process 675190]
[Detaching after fork from child process 675211]
[Detaching after fork from child process 675232]
[Detaching after fork from child process 675253]
[Detaching after fork from child process 675274]
[Detaching after fork from child process 675295]
[Detaching after fork from child process 675316]
[Detaching after fork from child process 675337]
[Detaching after fork from child process 675358]
[Detaching after fork from child process 675379]
⠼ | 1     284 | focei-wang2007                                                                                                                                                                  malloc(): unsorted double linked list corrupted

Thread 1 "R" received signal SIGABRT, Aborted.
__GI_raise (sig=sig@entry=6) at ../sysdeps/unix/sysv/linux/raise.c:50
50      ../sysdeps/unix/sysv/linux/raise.c: No such file or directory.
(gdb) bt
#0  __GI_raise (sig=sig@entry=6) at ../sysdeps/unix/sysv/linux/raise.c:50
nlmixr2/nlmixr2#1  0x00007ffff7927859 in __GI_abort () at abort.c:79
nlmixr2/nlmixr2#2  0x00007ffff79923ee in __libc_message (action=action@entry=do_abort, fmt=fmt@entry=0x7ffff7abc285 "%s\n") at ../sysdeps/posix/libc_fatal.c:155
nlmixr2/nlmixr2#3  0x00007ffff799a47c in malloc_printerr (str=str@entry=0x7ffff7abead8 "malloc(): unsorted double linked list corrupted") at malloc.c:5347
nlmixr2/nlmixr2#4  0x00007ffff799d46c in _int_malloc (av=av@entry=0x7ffff7aedb80 <main_arena>, bytes=bytes@entry=16384) at malloc.c:3744
nlmixr2/nlmixr2#5  0x00007ffff79a0d15 in __libc_calloc (n=<optimized out>, elem_size=<optimized out>) at malloc.c:3428
nlmixr2/nlmixr2#6  0x00007ffff7c84075 in R_chk_calloc () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#7  0x00007fffee7da434 in rxOptionsIni () at par_solve.cpp:1599
nlmixr2/nlmixr2#8  0x00007fffee85f155 in rxSolveFree () at rxData.cpp:2281
nlmixr2/nlmixr2#9  0x00007fffee7e8a98 in _rxode2_rxSolveFree_try () at RcppExports.cpp:1023
nlmixr2/nlmixr2#10 0x00007fffee7e8c0c in _rxode2_rxSolveFree () at RcppExports.cpp:1031
nlmixr2/nlmixr2#11 0x00007ffff7bf5544 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#12 0x00007ffff7c3834a in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#13 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#14 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#15 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#16 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#17 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#18 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#19 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#20 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#21 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#22 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#23 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#24 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#25 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#26 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#27 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#28 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#29 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#30 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/rxode2#7 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#32 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#33 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#34 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#35 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#36 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#37 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#38 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#39 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#40 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#41 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#42 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#43 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#44 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#45 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#46 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
nlmixr2/nlmixr2#47 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#48 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#49 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#50 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#51 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#52 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#53 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#54 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#55 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#56 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
--Type <RET> for more, q to quit, c to continue without paging--c
#57 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#58 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#59 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#60 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#61 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#62 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#63 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#64 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#65 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#66 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#67 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#68 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#69 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#70 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#71 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#72 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#73 0x00007ffff7c4f4f3 in ?? () from /usr/lib/R/lib/libR.so
#74 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#75 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#76 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#77 0x00007ffff7c924f4 in ?? () from /usr/lib/R/lib/libR.so
#78 0x00007ffff7c92930 in ?? () from /usr/lib/R/lib/libR.so
#79 0x00007ffff7c92cf7 in ?? () from /usr/lib/R/lib/libR.so
#80 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#81 0x00007ffff7c4f4f3 in ?? () from /usr/lib/R/lib/libR.so
#82 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#83 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#84 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#85 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#86 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#87 0x00007ffff7c4bc5f in Rf_eval () from /usr/lib/R/lib/libR.so
#88 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#89 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#90 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#91 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#92 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#93 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#94 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#95 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#96 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#97 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#98 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#99 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#100 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#101 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#102 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#103 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#104 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#105 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#106 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#107 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#108 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#109 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#110 0x00007ffff7c50ab2 in ?? () from /usr/lib/R/lib/libR.so
#111 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#112 0x00007ffff7c4f4f3 in ?? () from /usr/lib/R/lib/libR.so
#113 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#114 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#115 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#116 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#117 0x00007ffff7c50ab2 in ?? () from /usr/lib/R/lib/libR.so
#118 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#119 0x00007ffff7c4f4f3 in ?? () from /usr/lib/R/lib/libR.so
#120 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#121 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#122 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#123 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#124 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#125 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#126 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#127 0x00007ffff7c924f4 in ?? () from /usr/lib/R/lib/libR.so
#128 0x00007ffff7c92930 in ?? () from /usr/lib/R/lib/libR.so
#129 0x00007ffff7c92cf7 in ?? () from /usr/lib/R/lib/libR.so
#130 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#131 0x00007ffff7c4f4f3 in ?? () from /usr/lib/R/lib/libR.so
#132 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#133 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#134 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#135 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#136 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#137 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#138 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#139 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#140 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#141 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#142 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#143 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#144 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#145 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#146 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#147 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#148 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#149 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#150 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#151 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#152 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#153 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#154 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#155 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#156 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#157 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#158 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#159 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#160 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#161 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#162 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#163 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#164 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#165 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#166 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#167 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#168 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#169 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#170 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#171 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#172 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#173 0x00007ffff7c52056 in ?? () from /usr/lib/R/lib/libR.so
#174 0x00007ffff7c30ba1 in ?? () from /usr/lib/R/lib/libR.so
#175 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#176 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#177 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#178 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#179 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#180 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#181 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#182 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#183 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#184 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#185 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#186 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#187 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#188 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#189 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#190 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#191 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#192 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#193 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#194 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#195 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#196 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#197 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#198 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#199 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#200 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#201 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#202 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#203 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#204 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#205 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#206 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#207 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#208 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#209 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#210 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#211 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#212 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#213 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#214 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#215 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#216 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#217 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#218 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#219 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#220 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#221 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#222 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#223 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#224 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#225 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#226 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#227 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#228 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#229 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#230 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#231 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#232 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#233 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#234 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#235 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#236 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#237 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#238 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#239 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#240 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#241 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#242 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#243 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#244 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#245 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#246 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#247 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#248 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#249 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#250 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#251 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#252 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#253 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#254 0x00007ffff7c51029 in R_forceAndCall () from /usr/lib/R/lib/libR.so
#255 0x00007ffff7b7a277 in ?? () from /usr/lib/R/lib/libR.so
#256 0x00007ffff7c9022f in ?? () from /usr/lib/R/lib/libR.so
#257 0x00007ffff7c30991 in ?? () from /usr/lib/R/lib/libR.so
#258 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#259 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#260 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#261 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#262 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#263 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#264 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#265 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#266 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#267 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#268 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#269 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#270 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#271 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#272 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#273 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#274 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#275 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#276 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#277 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#278 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#279 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#280 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#281 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#282 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#283 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#284 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#285 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#286 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#287 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#288 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#289 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#290 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#291 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#292 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#293 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#294 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#295 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#296 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#297 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#298 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#299 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#300 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#301 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#302 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#303 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#304 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#305 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#306 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#307 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#308 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#309 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#310 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#311 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#312 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#313 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#314 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#315 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#316 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#317 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#318 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#319 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#320 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#321 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#322 0x00007ffff7c7fe62 in Rf_ReplIteration () from /usr/lib/R/lib/libR.so
#323 0x00007ffff7c80200 in ?? () from /usr/lib/R/lib/libR.so
#324 0x00007ffff7c802c0 in run_Rmainloop () from /usr/lib/R/lib/libR.so
#325 0x000055555555509f in main ()
#326 0x00007ffff79290b3 in __libc_start_main (main=0x555555555080 <main>, argc=3, argv=0x7fffffffe3d8, init=<optimized out>, fini=<optimized out>, rtld_fini=<optimized out>, stack_end=0x7fffffffe3c8) at ../csu/libc-start.c:308
#327 0x00005555555550de in _start ()

[mattfidler]

Here is the issue:

https://github.com/nlmixr2/rxode2/blob/ac32368486d4b4aaa83b415a6ee6c44e2c4c3214/src/par_solve.cpp#L1599

[mattfidler]

@billdenney Can you confirm this works for you?

[billdenney]

Testing on my Linux box now makes it past focei-wang2007. But, I have a new crash that I don't know if it's related or not. No crashes while running rxode2 tests, but a crash when running nlmixr2 tests:

Error (test-npde.R:1:1): npde
Error: C stack usage  376357540 is too close to the limit
────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
✖ | 1       0 | precondition [0.1s]
────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
Error (test-precondition.R:24:3): precondition tests
Error in `rxModelVars_(obj)`: Evaluation error: Value of SET_STRING_ELT() must be a 'CHARSXP' not a 'environment'.
Backtrace:
  1. base::suppressMessages(...)
       at test-precondition.R:24:2
  6. nlmixr2::nlmixr2.function(...)
       at nlmixr2/R/nlmixr2.R:150:2
  7. rxode2::rxode(object)
       at nlmixr2/R/nlmixr2.R:165:2
  8. rxode2:::.rxFunction2ui(model)
  9. rxode2 .fun()
 10. rxode2::model(...)
 15. rxode2:::.errProcessExpression(...)
 16. rxode2::rxModelVars(paste(.env$lstChr[-.env$predDf$line], collapse = "\n"))
 17. rxode2:::rxModelVars_(obj)
────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
⠏ |         0 | saem-aic
Thread 11 "R" received signal SIGSEGV, Segmentation fault.
[Switching to Thread 0x7fffe9919700 (LWP 706924)]
0x00007ffff7c833bc in ?? () from /usr/lib/R/lib/libR.so
(gdb) bt
#0  0x00007ffff7c833bc in ?? () from /usr/lib/R/lib/libR.so
#1  0x00007ffff7c88986 in ?? () from /usr/lib/R/lib/libR.so
#2  0x00007ffff7c8c13f in ?? () from /usr/lib/R/lib/libR.so
#3  0x00007ffff7c3bd94 in ?? () from /usr/lib/R/lib/libR.so
#4  0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#5  0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#6  0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#7  0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#8  0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#9  0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#10 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#11 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#12 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#13 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#14 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#15 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#16 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#17 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#18 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#19 0x00007ffff7c51029 in R_forceAndCall () from /usr/lib/R/lib/libR.so
#20 0x00007ffff7b7a277 in ?? () from /usr/lib/R/lib/libR.so
#21 0x00007ffff7c9022f in ?? () from /usr/lib/R/lib/libR.so
#22 0x00007ffff7c30991 in ?? () from /usr/lib/R/lib/libR.so
--Type <RET> for more, q to quit, c to continue without paging--c
#23 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#24 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#25 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#26 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#27 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#28 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#29 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#30 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#31 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#32 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#33 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#34 0x00007ffff7c51029 in R_forceAndCall () from /usr/lib/R/lib/libR.so
#35 0x00007ffff7b7a277 in ?? () from /usr/lib/R/lib/libR.so
#36 0x00007ffff7c9022f in ?? () from /usr/lib/R/lib/libR.so
#37 0x00007ffff7c30991 in ?? () from /usr/lib/R/lib/libR.so
#38 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#39 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#40 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#41 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#42 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#43 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#44 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#45 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#46 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#47 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#48 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#49 0x00007ffff7c51029 in R_forceAndCall () from /usr/lib/R/lib/libR.so
#50 0x00007ffff7b7a277 in ?? () from /usr/lib/R/lib/libR.so
#51 0x00007ffff7c9022f in ?? () from /usr/lib/R/lib/libR.so
#52 0x00007ffff7c30991 in ?? () from /usr/lib/R/lib/libR.so
#53 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#54 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#55 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#56 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#57 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#58 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#59 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#60 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#61 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#62 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#63 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#64 0x00007ffff7c51029 in R_forceAndCall () from /usr/lib/R/lib/libR.so
#65 0x00007ffff7b7a277 in ?? () from /usr/lib/R/lib/libR.so
#66 0x00007ffff7c9022f in ?? () from /usr/lib/R/lib/libR.so
#67 0x00007ffff7c30991 in ?? () from /usr/lib/R/lib/libR.so
#68 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#69 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#70 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#71 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#72 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#73 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#74 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#75 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#76 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#77 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#78 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#79 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#80 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#81 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#82 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#83 0x00007ffff7c51029 in R_forceAndCall () from /usr/lib/R/lib/libR.so
#84 0x00007ffff7b7a277 in ?? () from /usr/lib/R/lib/libR.so
#85 0x00007ffff7c9022f in ?? () from /usr/lib/R/lib/libR.so
#86 0x00007ffff7c30991 in ?? () from /usr/lib/R/lib/libR.so
#87 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#88 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#89 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#90 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#91 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#92 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#93 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#94 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#95 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#96 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#97 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#98 0x00007ffff7c51029 in R_forceAndCall () from /usr/lib/R/lib/libR.so
#99 0x00007ffff7b7a277 in ?? () from /usr/lib/R/lib/libR.so
#100 0x00007ffff7c9022f in ?? () from /usr/lib/R/lib/libR.so
#101 0x00007ffff7c30991 in ?? () from /usr/lib/R/lib/libR.so
#102 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#103 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#104 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#105 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#106 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#107 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#108 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#109 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#110 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#111 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#112 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#113 0x00007ffff7c51029 in R_forceAndCall () from /usr/lib/R/lib/libR.so
#114 0x00007ffff7b7a277 in ?? () from /usr/lib/R/lib/libR.so
#115 0x00007ffff7c9022f in ?? () from /usr/lib/R/lib/libR.so
#116 0x00007ffff7c30991 in ?? () from /usr/lib/R/lib/libR.so
#117 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#118 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#119 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#120 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#121 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#122 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#123 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#124 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#125 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#126 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#127 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#128 0x00007ffff7c51029 in R_forceAndCall () from /usr/lib/R/lib/libR.so
#129 0x00007ffff7b7a277 in ?? () from /usr/lib/R/lib/libR.so
#130 0x00007ffff7c9022f in ?? () from /usr/lib/R/lib/libR.so
#131 0x00007ffff7c30991 in ?? () from /usr/lib/R/lib/libR.so
#132 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#133 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#134 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#135 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#136 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#137 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#138 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#139 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#140 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#141 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#142 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#143 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#144 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#145 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#146 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#147 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#148 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#149 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#150 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#151 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#152 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#153 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#154 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#155 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#156 0x00007ffff7c1c5d1 in Rf_errorcall () from /usr/lib/R/lib/libR.so
#157 0x00007ffff7c1cbd9 in Rf_error () from /usr/lib/R/lib/libR.so
#158 0x00007fffee7eb74e in _rxode2_rxModelVars_ (objSEXP=<optimized out>) at RcppExports.cpp:672
#159 0x00007ffff7bf5530 in ?? () from /usr/lib/R/lib/libR.so
#160 0x00007ffff7c3834a in ?? () from /usr/lib/R/lib/libR.so
#161 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#162 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#163 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#164 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#165 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#166 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#167 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#168 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#169 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#170 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#171 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#172 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#173 0x00007ffff7c51af2 in ?? () from /usr/lib/R/lib/libR.so
#174 0x00007ffff7c30ba1 in ?? () from /usr/lib/R/lib/libR.so
#175 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#176 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#177 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#178 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#179 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#180 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#181 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#182 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#183 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#184 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#185 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#186 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#187 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#188 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#189 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#190 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#191 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#192 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#193 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#194 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#195 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#196 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#197 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#198 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#199 0x00007ffff7c4f4f3 in ?? () from /usr/lib/R/lib/libR.so
#200 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#201 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#202 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#203 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#204 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#205 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#206 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#207 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#208 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#209 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#210 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#211 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#212 0x00007ffff7c50ab2 in ?? () from /usr/lib/R/lib/libR.so
#213 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#214 0x00007ffff7c4f4f3 in ?? () from /usr/lib/R/lib/libR.so
#215 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#216 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#217 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#218 0x00007ffff7c924f4 in ?? () from /usr/lib/R/lib/libR.so
#219 0x00007ffff7c92930 in ?? () from /usr/lib/R/lib/libR.so
#220 0x00007ffff7c92cf7 in ?? () from /usr/lib/R/lib/libR.so
#221 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#222 0x00007ffff7c4f4f3 in ?? () from /usr/lib/R/lib/libR.so
#223 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#224 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#225 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#226 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#227 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#228 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#229 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#230 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#231 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#232 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#233 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#234 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#235 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#236 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#237 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#238 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#239 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#240 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#241 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#242 0x00007ffff7c50ab2 in ?? () from /usr/lib/R/lib/libR.so
#243 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#244 0x00007ffff7c4f4f3 in ?? () from /usr/lib/R/lib/libR.so
#245 0x00007ffff7c4be3b in Rf_eval () from /usr/lib/R/lib/libR.so
#246 0x00007ffff7c51af2 in ?? () from /usr/lib/R/lib/libR.so
#247 0x00007ffff7c30ba1 in ?? () from /usr/lib/R/lib/libR.so
#248 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#249 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#250 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#251 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#252 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#253 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#254 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#255 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#256 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#257 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#258 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#259 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#260 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#261 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#262 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#263 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#264 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#265 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#266 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#267 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#268 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#269 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#270 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#271 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#272 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#273 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#274 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#275 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#276 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#277 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#278 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#279 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#280 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#281 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#282 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#283 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#284 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#285 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#286 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#287 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#288 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#289 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#290 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#291 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#292 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#293 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#294 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#295 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#296 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#297 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#298 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#299 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#300 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#301 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#302 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#303 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#304 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#305 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#306 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#307 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#308 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#309 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#310 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#311 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#312 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#313 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#314 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#315 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#316 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#317 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#318 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#319 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#320 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#321 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#322 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#323 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#324 0x00007ffff7c52056 in ?? () from /usr/lib/R/lib/libR.so
#325 0x00007ffff7c30ba1 in ?? () from /usr/lib/R/lib/libR.so
#326 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#327 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#328 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#329 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#330 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#331 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#332 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#333 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#334 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#335 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#336 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#337 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#338 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#339 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#340 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#341 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#342 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#343 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#344 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#345 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#346 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#347 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#348 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#349 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#350 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#351 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#352 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#353 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#354 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#355 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#356 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#357 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#358 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#359 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#360 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#361 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#362 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#363 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#364 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#365 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#366 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#367 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#368 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#369 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#370 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#371 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#372 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#373 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#374 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#375 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#376 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#377 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#378 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#379 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#380 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#381 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#382 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#383 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#384 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#385 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#386 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#387 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#388 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#389 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#390 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#391 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#392 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#393 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#394 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#395 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#396 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#397 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#398 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#399 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#400 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#401 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#402 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#403 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#404 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#405 0x00007ffff7c51029 in R_forceAndCall () from /usr/lib/R/lib/libR.so
#406 0x00007ffff7b7a277 in ?? () from /usr/lib/R/lib/libR.so
#407 0x00007ffff7c9022f in ?? () from /usr/lib/R/lib/libR.so
#408 0x00007ffff7c30991 in ?? () from /usr/lib/R/lib/libR.so
#409 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#410 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#411 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#412 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#413 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#414 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#415 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#416 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#417 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#418 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#419 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#420 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#421 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#422 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#423 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#424 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#425 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#426 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#427 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#428 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#429 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#430 0x00007ffff7c4c3dc in ?? () from /usr/lib/R/lib/libR.so
#431 0x00007ffff7c4c888 in ?? () from /usr/lib/R/lib/libR.so
#432 0x00007ffff7c3725c in ?? () from /usr/lib/R/lib/libR.so
#433 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#434 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#435 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#436 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#437 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#438 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#439 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#440 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#441 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#442 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#443 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#444 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#445 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#446 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#447 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#448 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#449 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#450 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#451 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#452 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#453 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#454 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#455 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#456 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#457 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#458 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#459 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#460 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#461 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#462 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#463 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#464 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#465 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#466 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#467 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#468 0x00007ffff7c39296 in ?? () from /usr/lib/R/lib/libR.so
#469 0x00007ffff7c4b948 in Rf_eval () from /usr/lib/R/lib/libR.so
#470 0x00007ffff7c4d80f in ?? () from /usr/lib/R/lib/libR.so
#471 0x00007ffff7c4e702 in Rf_applyClosure () from /usr/lib/R/lib/libR.so
#472 0x00007ffff7c4bb6f in Rf_eval () from /usr/lib/R/lib/libR.so
#473 0x00007ffff7c7fe62 in Rf_ReplIteration () from /usr/lib/R/lib/libR.so
#474 0x00007ffff7c80200 in ?? () from /usr/lib/R/lib/libR.so
#475 0x00007ffff7c802c0 in run_Rmainloop () from /usr/lib/R/lib/libR.so
#476 0x000055555555509f in main ()
#477 0x00007ffff79290b3 in __libc_start_main (main=0x555555555080 <main>, argc=3, argv=0x7fffffffe3d8, init=<optimized out>, fini=<optimized out>, rtld_fini=<optimized out>, stack_end=0x7fffffffe3c8) at ../csu/libc-start.c:308
#478 0x00005555555550de in _start ()
(gdb)

[mattfidler]

Error: C stack usage 376357540 is too close to the limit is hard to track down, and often causes issues elsewhere (though hard to track down, with no meaningful backtrace). But at least the large wang2007 test works.

[mattfidler]

For now I will close this until I can figure out where or how to fix the stack usage

[billdenney]

I agree with closing this. I'm getting a new crash in nlmixr2, and I'll report it separately.