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nloyfer / wgbs_tools

tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies
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Workflow question #60

Open gevro opened 5 months ago

gevro commented 5 months ago

Hi, What is the recommended workflow for generating the required BAM files?

Also, what is the recommended tools for clustering wgbs samples? ie, samples from different tissues and then unbiased clustering to see which samples are similar.

Thank you!

gevro commented 5 months ago

Hello, I am curious if you have advice about this? Thanks!