nmdp-bioinformatics / phycus

Service used for curation of Haplotype Frequency
GNU Lesser General Public License v3.0
7 stars 21 forks source link

Add quality metric calculation #89

Closed fscheel closed 5 years ago

fscheel commented 5 years ago

The infrastructure is designed to give the developer the maximum flexibility about how to calculate these measures. In the case of the very simple measure DIV_50 (number of frequencies in descending order, which are needed to reach a probability > 0.5) is calculated on the server itself. But more complicated or taxing measures might also be developed using AWS lambda or other tools.

During development, we noticed that we should not allow the cliuent to provide quality measures themselves, so we are now ignoring client provided quality measures completely and silently. This change was also documented.

References #79