Capture requirements for interpretation service

nmdp-bioinformatics / pipeline

Consensus assembly and allele interpretation pipeline.

GNU Lesser General Public License v3.0

7 stars 7 forks source link

Capture requirements for interpretation service #43

Closed ghost closed 9 years ago

ckennedy-nmdp commented 10 years ago

(i) Simplify reverse complement issue -- organize into pipeline or interpretation. I prefer interpretation because the pipeline is for processing of genomic data. (ii) Scoring (ordering) of interpreted alleles (GL strings). (iii) Add or flag novel alleles. (iv) User- or machine-interface in HML format and are required. (v) Truly RESTful. (vi) Proper filtering of GL strings (ie not using awk) -- will depend on scoring and ordering.

ghost commented 10 years ago

clear reporting of error conditions
option to register GL strings on the fly (return URIs)

ghost commented 9 years ago

Closing issue, will track internally.