Python + qgis

environment.yml

  # Core scientific python stack
  - cython~=3.0.10 # optimization, C API access
  - flox~=0.9.7 # optimization, xarray operations
  - hypothesis==6.58.0 # needed by numpy testing tools
  - networkx==2.8.8
  - numba~=0.60.0 # high-performance numerics
  - numpy==1.26.4
  - pandas>=2.0.1,<3.0
  - scikit-image~=0.24.0
  - scikit-learn>=1.2.2,<2.0.0
  - scipy>=1.10
  - statsmodels==0.13.5
  - sympy~=1.12
  - xarray>=2024.05.0

  # Visualization packages
  - bokeh~=3.2.2
  - cartopy~=0.23.0 # geospatial plotting with matplotlib
  - geemap~=0.32
  - geoviews~=1.10.1
  - hvplot~=0.10.0
  - ipyleaflet~=0.19.2
  - ipympl~=0.9.3 # This enables matplotlib interaction with jupyter widgets
  - leafmap~=0.36
  - lonboard~=0.9
  - matplotlib~=3.9.0
  - plotly~=5.18.0
  - seaborn~=0.13.2 # statistical plotting with matplotlib

  # Machine Learning packages
  - py-xgboost~=2.1.1=cpu*

  # Geospatial data packages
  - geopandas>=0.14.4
  - pygmt~=0.12.0
  - rasterio~=1.3
  - rioxarray~=0.17.0

  # File formats and file management, download, dataset caching
  - h5py~=3.11
  - h5netcdf~=1.3.0
  - nco~=5.1.6
  - pooch~=1.8.0
  - zarr~=2.18
  - kerchunk~=0.2

  # Cloud access tools and libraries
  - awscli~=2.17
  - boto3
  - s3fs>=2023.6.0
  # handle login and similar details for accessing earthdata protected data
  # https://github.com/nsidc/earthaccess
  - earthaccess~=0.10.0
  # Access datasets exposed via STAC
  - pystac-client~=0.8.3
  - stackstac~=0.5.1
  # Access datasets exposed via intake catalogs
  - intake==0.6.6
  - intake-esm>=2023.7.7
  - intake-stac==0.4.0
  - intake-xarray==0.6.1
  - gcsfs>=2023.5.0

  # Distributed computing
  - dask>=2023.12.1
  - dask-labextension~=7.0.0
  - dask-geopandas~=0.4.1

  # Other useful generic python packages
  - pillow~=10.2.0 # Python imaging library, useful for many image-related tasks
  - pytest~=8.3
  - pytest-cov~=5.0
  - pep8~=1.7
  - flake8~=7.1
  - tqdm~=4.66 # progress bars, with notebook support

  # QGIS
  - qgis~=3.38.0
  # Maybe needed for qgis? https://github.com/conda-forge/qgis-feedstock/issues/263
  - pyopencl

apt.txt will also might need this for qgis

# Needed for qgis maybe? https://github.com/conda-forge/pygridgen-feedstock/issues/10
libgl1-mesa-glx

nmfs-opensci / py-rocket-2

create py-rocket with the core sci set of Python packages #10

Python + qgis