in runSPADE.R, there is mentioned layout option for nor overlapping verticles:
# Option 1: SPADE.layout.arch ...this is fast, but allows overlapping nodes and edges# Option 2: SPADE.layout.arch_layout ...this is slow, but prevents overlapping nodes and edges
But SPADE.layout.arch_layout is not in the source code and cant be used.
in runSPADE.R, there is mentioned layout option for nor overlapping verticles:
# Option 1: SPADE.layout.arch ...this is fast, but allows overlapping nodes and edges
# Option 2: SPADE.layout.arch_layout ...this is slow, but prevents overlapping nodes and edges
But SPADE.layout.arch_layout is not in the source code and cant be used.