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nolanlab / vortex

VorteX Clustering Environment - Java graphical tool for single-cell analysis, clustering and visualization. Latest release:
https://github.com/nolanlab/vortex/releases
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exporting MST data not showing different antibodies #2

Closed Ronschackmann closed 7 years ago

Ronschackmann commented 7 years ago

Hi Nikolay, Thank you for continuing to develop and improve x-shift/vortex, I enjoy the software a lot!

With the latest version (I'm using "vortex_dist_24-Dec-16"), I've encountered two issues:

1) When creating an MST and hitting "Export images" in the bottom left, all the images exported look the same. The file names have the different antibodies, but the node-colors of all images are the same (the scale bar files do appear correct; furthermore exporting from the force-directed-layout also works properly)

example of 3 ab's + scale bars using "Export images" button: image

2) There is a typo; after running a force-directed layout next to the check-box it says "Prevent overap" image

Cheers, Ron Schackmann

nsamusik commented 7 years ago

Hi Ron,

Thanks very much for your feedback! I fixed the MST/DMT export and fixed the typo.

Please check out the new build: https://github.com/nolanlab/vortex/releases/tag/2-Jan-2017

Ronschackmann commented 7 years ago

Thanks Nikolay!