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noriakis / CBNplot

Bayesian network plot for the enrichment analysis results
https://noriakis.github.io/software/CBNplot
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Error reported in R and website tools #8

Closed millersan closed 2 years ago

millersan commented 2 years ago

Dear authors, Please accept my sincere thanks for providing such a useful tool. But I encountered some errors reported when using my own data.

orgDb: org.Mm.eg.db

Error in R:

Error in data.type(x) :   variable Mx1 is not supported in bnlearn (type: integer).
(genelist: ENTREZ IDs(.txt)；expression table: row: ENTREZ IDs, column: samples)

Error in the website:

something wrong with reading the gene list data, probably the wrong specification of gene ID type.
(genelist: ENSEBLE IDs(.txt)；expression table: row: ENSEBLE IDs, column: samples)
millersan commented 2 years ago

Solved by changing integer data to numeric data.