No module named 'sklearn.svm.classes'

novoalab / EpiNano

Detection of RNA modifications from Oxford Nanopore direct RNA sequencing reads (Liu*, Begik* et al., Nature Comm 2019)

GNU General Public License v2.0

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No module named 'sklearn.svm.classes' #140

Closed matjack2000 closed 4 months ago

matjack2000 commented 1 year ago

Hi, I'm trying to use Epinano_Predict : 'Python /home/labct/EpiNano/Epinano_Predict.py --model /home/labct/EpiNano/models/rrach.q3.mis3.del3.linear.dump --predict reads-ref.sorted.plus_strand.per.site.5mer.csv --columns 8,13,23 --out_prefix wt' And I have this error : ModuleNotFoundError: No module named 'sklearn.svm.classes'

I'm using the latest version of Scikit-learn (1.22) and I tried with an older one (0.24.2), without succes. I'm on Ubuntu. Thanks in advance for your answer.

DelphIONe commented 1 year ago

Same problem here.

Thanks for your answer!

Huanle commented 1 year ago

Hi @DelphIONe @matjack2000

Can you install the required packages listed here and try again? Best, Huanle

enovoa commented 4 months ago

Closing this issue as I assume it was resolved installing the dependencies. Thanks!