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novoalab / EpiNano

Detection of RNA modifications from Oxford Nanopore direct RNA sequencing reads (Liu*, Begik* et al., Nature Comm 2019)
GNU General Public License v2.0
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StopIteration #90

Closed AminaLEM closed 3 years ago

AminaLEM commented 3 years ago

Hi, Have you ever encounter this issue, the execution of the code stop at this line 'firstline = next (tsv)' in the 'split_tsv_for_per_site_var_freq' function ?

AminaLEM commented 3 years ago

It was a problem of samtools library