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npolar / marine-db

https://doi.org/10.21334/marine-db
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Taxon refers to missing sample #7

Closed cnrdh closed 6 years ago

cnrdh commented 6 years ago

Occurrence lines: 146388 Missing sample event metadata: 115

 38 Taxon occurrence refers to missing sample Arcex2016/PHT-063
 36 Taxon occurrence refers to missing sample ICE10-455
  5 Taxon occurrence refers to missing sample MOSJ2014/PHT-077
 13 Taxon occurrence refers to missing sample N-ICE2015/PHT-142
 18 Taxon occurrence refers to missing sample N-ICE2015/PHT-143
  5 Taxon occurrence refers to missing sample N-ICE2015/PHT-192
cnrdh commented 6 years ago

2010


grep -r "ICE10-45[456]" data/deposit/2010/*sample*
data/deposit/2010/ice_2010_samplelog.csv:14939,ICE2010,ICE10-454,R9b,81.5532,22.6899,889,22/08/2010 16:10,Niskin bottle,5,5,,Phytoplankton taxonomy,Philipp Assmy,ICE10-16-15,,,,,
data/deposit/2010/ice_2010_samplelog.csv:14941,ICE2010,ICE10-456,R9b,81.5532,22.6899,889,22/08/2010 16:10,Niskin bottle,25,25,,Phytoplankton taxonomy,Philipp Assmy,ICE10-16-15; Chl a max,,,,,
conrad@arken:~/npolar/marine-db$ ^C
cnrdh commented 6 years ago

2014


grep -r PHT-07[56789] data/deposit/2014/*sample*

data/deposit/2014/mosj_ice_2014_samplelog.csv:"ICE2014","PHT-075","R1b",80.1317,22.1822,185,"2014-07-27 03:32 UTC","Niskin bottle",10.0,,,"Phytoplankton taxonomy","Philipp Assmy","Did not reach R1 due to heavy ice, but were close to station",
data/deposit/2014/mosj_ice_2014_samplelog.csv:"ICE2014","PHT-076","R1b",80.1317,22.1822,185,"2014-07-27 03:32 UTC","Niskin bottle",0.0,,,"Phytoplankton taxonomy","Philipp Assmy","Did not reach R1 due to heavy ice, but were close to station",
cnrdh commented 6 years ago

Anette: Arcex 2016, PHT-063: Den har antagelig ikke blitt lagt inn fordi den manglet lat & long. Jeg har inkludert lat og long i fil « arcex_2016_samplelog.xlsx». Expedition: Arcex2016; Sample name: PHT-063; Station: Outside ice station; Latitude: 78.8851; Longitude: 23.2967; Sampling date: 24.05.2016 12:00; Gear: Niskin bottle; Sample type: Phytoplankton taxonomy; Responsible: Philipp Assmy)

ICE10-455: copy info from previous entry “ICE10-454”, sampling depth 10m MOSJ2014/PHT-077: copy info from previous entry “MOSJ2014/PHT-076”, assumed sampling depth 5m N-ICE2015/PHT-142 & PHT-143: copy info from previous “PHT-141, assumed sampling depth 15m & 25m. Jeg har lagt til info i “n-ice_2015_leg3_4_samplelog.xlsx» N-ICE2015/PHT-192:Det manglet expedition derfor har den antagelig ikke blitt lagt inn. Jeg har inkludert expedition i «n-ice_2015_leg5_6_samplelog.xlsx»

cnrdh commented 6 years ago

Fixed

Arcex2016,PHT-063,"Outside ""ice station""",78.8851,23.2967,,24/05/2016 12:00,Niskin bottle,5,,,Phytoplankton taxonomy,Philipp Assmy,

14939,ICE2010,ICE10-455,R9b,81.5532,22.6899,889,22/08/2010 16:10,Niskin bottle,10,10,,Phytoplankton taxonomy,Philipp Assmy,,,,,,

"ICE2014","PHT-077","R1b",80.1317,22.1822,185,"2014-07-27 03:32 UTC","Niskin bottle",5,,,"Phytoplankton taxonomy","Philipp Assmy","Did not reach R1 due to heavy ice, but were close to station",
cnrdh commented 6 years ago

occurrence-join-sampling-events completed . Lines: 148598, missing sample event metadata: 0