Cytoscape is capable of computing a large number of statistics about a network, including stress, clustering coefficients, or eccentricity.
Although wikipedia is a good source of documentation for many of these terms, better documentation would be useful in providing explanation of the concepts and power of these statistics.
Goal
Present theoretical background behind common statistical functions
Document edge cases and limitations
Technical Skills
A reasonable understanding of statistics and network notations.
Background
Goal
Technical Skills
Link Provide link to current documentation: http://manual.cytoscape.org/en/stable/Network_Analyzer.html
Potential Mentors
Contact
adam.treister@gladstone.ucsf.edu