Adjacency Matrix Renderer

maxkfranz commented 8 years ago

Background

Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of Apps are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.

Goal

Implement an adjacency matrix renderer as a Cytoscape app.

Description

Cytoscape has a modular architecture, and so different renderers can be used to show the graph. For example, the Cy3D app is a 3D renderer. This project would involve the implementation of an adjacency matrix renderer for Cytoscape as an app. It would be responsible for drawing the nodes and edges in the graph and for handling events and gestures, such as zoom, pan, click.

Potential Mentors

Christian Lopes, Mike Kucera

Contact

chrtannus@gmail.com

floraliu1011 commented 6 years ago

Hi mentors,

I'm a second year computer science student at university of Toronto and I'm really interested in this project. I have prior experience in Java, Python and R. Could you kindly refer me to some resources that can help me get started?

thanks, Flora

maxkfranz commented 6 years ago

@AlexanderPico Would you please re-assign this to @chrtannus or @mikekucera. I think Christian and I wrote up this project on my machine using my account, but this isn't something I would be able to contribute to as effectively as Christian or Mike.

AlexanderPico commented 6 years ago

Sure. Will assign to @chrtannus... once he accepts invitation this NRNB team list. If he's not available, then we'll close the issue for this summer.

khanspers commented 5 years ago

Closing for GSoC 2019

nrnb / GoogleSummerOfCode