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nsalomonis / altanalyze

AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available from our website.
http://www.altanalyze.org
Apache License 2.0
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Wish for checkboxes and option to save settings #32

Closed GoogleCodeExporter closed 4 years ago

GoogleCodeExporter commented 9 years ago 
Hi,
This is just a wish to increase the usability.
I was using AltAnlyze now intensively over the last 10 days to analyze 
different murine expression data sets.
Certain things I had to redo with certain settings -but diferent from the 
default ones- for several datasets.
It would have been practical if I had the chance to save my settings and then 
just load them again. But so I had to type them in again and again and of 
course forgot to change the "rawp" to "adjp" and had to redo the thing again.
IF I do ORA I can choose between "one" of the listed ones and "all".
I was interested in only three of them. It would habe been nice to set that by 
checkboxes (or something equivalent) - I think checkboxes even had been part of 
a prior GO-Elite version (if I am not mistaken...).
THX
Mark

Original issue reported on code.google.com by mark.moe...@gmx.de on 2 Oct 2014 at 7:58

nsalomonis commented 4 years ago

This issue is best solved by using the command-line version of the software or running the compiled version with command-line options: https://altanalyze.readthedocs.io/en/latest/CommandLineMode/