Replicates can have different extension between them, e.g : fq, fq.gz, fastq, fastq.gz
Nonetheless, inside a replicate, the two read file (R1 and R2) can have different extensions (fastq/fq or fastq.gz/fq.gz) but must be both decompressed or compressed.
Handling of :
Replicates can have different extension between them, e.g : fq, fq.gz, fastq, fastq.gz Nonetheless, inside a replicate, the two read file (R1 and R2) can have different extensions (fastq/fq or fastq.gz/fq.gz) but must be both decompressed or compressed.