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nservant / HiC-Pro

HiC-Pro: An optimized and flexible pipeline for Hi-C data processing
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SyntaxError: invalid syntax when running split_sparse.py #331

Closed chenggang108 closed 4 years ago

chenggang108 commented 4 years ago

Hi,

I am running split_sparse.py to split matrix to each individual chromosome. I ran into a SyntaxError. Here is how it shows:

File "HiC-Pro/bin/utils/split_sparse.py", line 77 print str(chrnames[i-1]) + "..." ^ SyntaxError: invalid syntax

Anyone can help with it?

Thanks

Gang

nservant commented 4 years ago

Hi, I think you are using python 3. The current version of HiC-Pro only works with python 2. Best