nservant / HiC-Pro

HiC-Pro: An optimized and flexible pipeline for Hi-C data processing
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use binfile to build matrix #423

Open dhoneyi opened 3 years ago

dhoneyi commented 3 years ago

Hi, I am using the hic-pro build_matrix , but I want to use a prepared bedfile to build matrix, can I use the parameter '--binfile'? How can I use the function? Thanks.

nservant commented 3 years ago

Yes, you can provide a BED file to the --binfile parameter N