nservant / HiC-Pro

HiC-Pro: An optimized and flexible pipeline for Hi-C data processing
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digest_genome.py issue #454

Closed yinshiyi closed 3 years ago

yinshiyi commented 3 years ago

./HiC-Pro-master/bin/utils/digest_genome.py -r A^AGCTT -o human_hindiii.bed <(zcat ~/hg19.fa.gz)

error

chr18_gl000207_random... Traceback (most recent call last): File "./HiC-Pro-master/bin/utils/digest_genome.py", line 180, in np.concatenate([indices, [lengths[i]]])[:, np.newaxis]], IndexError: index 1 is out of bounds for axis 0 with size 1

Let me know if anyone has any ideas Thank you