nservant / HiC-Pro

HiC-Pro: An optimized and flexible pipeline for Hi-C data processing
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make install error #597

Closed IIrfan57 closed 8 months ago

IIrfan57 commented 8 months ago

Hello,

I am installing HiC-pro on a cluster. Make configure step gets completed but at the make install step, I am getting the following error:

Starting HiC-Pro installation ! export /HPC/miniconda3/envs/HiC-Pro/bin/bowtie2 in PATH export /HPC/miniconda3/envs/HiC-Pro/bin/samtools in PATH export /HPC/miniconda3/envs/HiC-Pro/bin/R in PATH export /HPC/miniconda3/envs/HiC-Pro/bin/python3.8 in PATH Checking dependencies

Checking HiC-Pro configuration

done ! make[1]: Leaving directory '/HiC-Pro' (HiC-Pro) [HiC-Pro]$ make install (g++ -Wall -O2 -std=c++0x -o build_matrix /HiC-Pro/scripts/src/build_matrix.cpp; mv build_matrix /HiC-Pro/scripts) (g++ -Wall -O2 -std=c++0x -o cutsite_trimming /HiC-Pro/scripts/src/cutsite_trimming.cpp; mv cutsite_trimming /HiC-Pro/scripts) cp -Ri /HPC/HiC-Pro /usr/local/bin//HiC-Pro_3.1.0 cp: cannot create directory '/usr/local/bin//HiC-Pro_3.1.0': Permission denied make: *** [Makefile:78: cp] Error 1

P.s. I have installed all the dependencies through Conda environment.yml along with the all the required tools such as bowtie2, samtools, R, python in a separate environment.

Blosers commented 3 months ago

您好,可以请问您是怎么解决这个问题的吗?我在安装过程中也出现了这样的问题,需要有管理员权限,进行sudo吗?