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nsheff / LOLA

Locus Overlap Analysis: Enrichment of Genomic Ranges
http://code.databio.org/LOLA
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PEP file read caching #32

Open nsheff opened 5 years ago

nsheff commented 5 years ago

We should make sure the PEP loading function has the same caching capability the current loadRegionDB function has:

https://github.com/joseverdezoto/LOLA/blob/127efbb6b273a526d64dd10a3a71460012288653/R/loadRegionDB.R#L288-L299

nsheff commented 5 years ago

@joseverdezoto can you look at this?

joseverdezoto commented 5 years ago

Looking into it. I'm updating the function so that it caches the regions.