Hello ,
I am trying to install r2vcftools in rstudio running on windows 11 machine.
remotes::install_github("nspope/r2vcftools")
_Downloading GitHub repo nspope/r2vcftools@HEAD
Running `R CMD build`...
* checking for file 'C:\Users\dralmazroa\AppData\Local\Temp\RtmpUTJOsu\remotes46c01407c28\nspope-r2vcftools-02b6f30/DESCRIPTION' ... OK
* preparing 'r2vcftools':
* checking DESCRIPTION meta-information ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
Omitted 'LazyData' from DESCRIPTION
* building 'r2vcftools_0.0.0.9000.tar.gz'
Installing package into ‘C:/Users/dralmazroa/AppData/Local/R/win-library/4.3’
(as ‘lib’ is unspecified)
* installing *source* package 'r2vcftools' ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'Filter' in package 'r2vcftools'
Checking for awk ... Error : awk not found!
Error: unable to load R code in package 'r2vcftools'
Execution halted
ERROR: lazy loading failed for package 'r2vcftools'
* removing 'C:/Users/dralmazroa/AppData/Local/R/win-library/4.3/r2vcftools'
Warning message:
In i.p(...) :
installation of package ‘C:/Users/DRALMA~2/AppData/Local/Temp/RtmpUTJOsu/file46c03e051320/r2vcftools_0.0.0.9000.tar.gz’ had non-zero exit status_
Then I installed awk through installer and awk is available in power shell. I set the path variable to "C:\Program Files (x86)\GnuWin32\bin\".
Please let me know why i am not able to install r2vcftools?
Thanks
Hello , I am trying to install r2vcftools in rstudio running on windows 11 machine.
remotes::install_github("nspope/r2vcftools")
Then I installed awk through installer and awk is available in power shell. I set the path variable to "C:\Program Files (x86)\GnuWin32\bin\".
Please let me know why i am not able to install r2vcftools? Thanks