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ntm / grexome-TIMC-Primary

exome pipeline from TIMC - primary analyses (FASTQs to GVCF)
GNU General Public License v3.0
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incorporate / test HELLO variant caller #1

Closed ntm closed 3 years ago

ntm commented 3 years ago

incorporate / test HELLO variant caller: https://github.com/anands-repo/hello https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-021-04311-4

ntm commented 3 years ago

HELLO doesn't produce GVCFs, this is a no-go for us: https://github.com/anands-repo/hello/issues/2