Material

[nuest]

(feel free to add, edit, or comment)

• https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1003858
• via Google
  • https://docs.docker.com/develop/develop-images/dockerfile_best-practices/
  • https://rock-it.pl/how-to-write-excellent-dockerfiles/
  • https://engineering.bitnami.com/articles/best-practices-writing-a-dockerfile.html
• https://github.com/search?q=dockerfile+reproducible
  • https://github.com/diegoferigo/devenv
  • https://github.com/Neflux/dockerparser/blob/master/check.py
  • https://github.com/Kaggle/docker-rstats/blob/master/Dockerfile (nice use of comments to document reasoning)
  • https://benmarwick.github.io/UW-eScience-docker-for-reproducible-research/#22
• https://github.com/search?q=dockerfile+%22reproducible+research%22&type=Issues
  • ...
• Examples of instructions for how to reproduce something with Docker
  • https://github.com/seabbs/ModelTBBCGEngland#using-docker
  • https://github.com/seabbs/tbinenglanddataclean#docker
  • https://github.com/seabbs/ExploreBCGOnOutcomes#docker
  • https://github.com/nuest/sensebox-binder#local-execution
• ...

Use https://allcontributors.org/ ?