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nuno-agostinho
/
psichomics
Interactive R package to quantify, analyse and visualise alternative splicing
http://nuno-agostinho.github.io/psichomics/
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Expect to contain "ensembl_havena_gene" in logic_name
#414
nuno-agostinho
closed
4 years ago
0
1.14.3
#413
nuno-agostinho
closed
4 years ago
0
1.14.2
#412
nuno-agostinho
closed
4 years ago
0
Replace Travis CI and AppVeyor with GitHub Actions
#411
nuno-agostinho
closed
4 years ago
1
Quick multiple ANOVA testing using a matrix as input
#410
nuno-agostinho
opened
4 years ago
0
Remove binary packages
#409
nuno-agostinho
closed
4 years ago
1
Fix unit tests for R 4.0
#408
nuno-agostinho
closed
4 years ago
0
the rownames of PSI generated using the custom annotation doesn't contain gene names
#407
YingziZhang-github
closed
4 years ago
3
'parseMatsAnnotation' requires "AFE" and "ALE" txt, which are not produced by rmats
#406
YingziZhang-github
closed
4 years ago
2
Import output from Whippet into Psichomics
#405
hegu2692
opened
4 years ago
2
Clean Travis CI config
#404
nuno-agostinho
closed
4 years ago
0
Dev
#403
nuno-agostinho
closed
4 years ago
0
Improve usage of pkgdown site
#402
nuno-agostinho
closed
4 years ago
0
psichomics 1.12.1
#401
nuno-agostinho
closed
4 years ago
0
[ImgBot] Optimize images
#400
imgbot[bot]
closed
4 years ago
0
Fix Windows warnings in CI tools
#399
nuno-agostinho
closed
4 years ago
0
Use `options()` to set package-wide options
#398
nuno-agostinho
opened
5 years ago
0
GitHub pages update
#397
nuno-agostinho
closed
5 years ago
0
Update GitHub pages
#396
nuno-agostinho
closed
5 years ago
0
Use ellipsis package?
#395
nuno-agostinho
opened
5 years ago
0
Avoid timeout on Windows
#394
nuno-agostinho
closed
5 years ago
0
Fix AppVeyor-specific slow unit tests
#393
nuno-agostinho
closed
5 years ago
0
Fix slow AppVeyor-specific unit testing
#392
nuno-agostinho
closed
5 years ago
0
Fix AppVeyor
#391
nuno-agostinho
closed
5 years ago
0
Appveyor patch
#390
nuno-agostinho
closed
5 years ago
0
Fix documentation of S3 Methods
#389
nuno-agostinho
closed
5 years ago
0
Support macOS testing via Travis-CI
#388
nuno-agostinho
closed
5 years ago
0
Fix appveyor.yml
#387
nuno-agostinho
closed
5 years ago
0
Copy-edit exported function documentation
#386
nuno-agostinho
closed
4 years ago
0
junction quantification data not loading
#385
MikeHH01
closed
5 years ago
3
Replace usage of deprecated function
#384
nuno-agostinho
closed
5 years ago
0
R.utils::evalWithTimeout() -> withTimeout()
#383
HenrikBengtsson
closed
5 years ago
5
Include link to explain cancer staging
#382
nuno-agostinho
opened
5 years ago
0
Export individual event differential statistics as table
#381
nuno-agostinho
opened
5 years ago
0
Add colour legend to AS and gene correlation analyses
#380
nuno-agostinho
opened
5 years ago
0
Create groups based on the individuals within survival cutoffs
#379
nuno-agostinho
opened
5 years ago
0
Allow to remove groups used for set operations
#378
nuno-agostinho
opened
5 years ago
0
Calculate survival for a gene based on samples with highest vs lowest top expression
#377
nuno-agostinho
opened
5 years ago
0
Add settings as attributes so they are universally accessible on CLI/GUI
#376
nuno-agostinho
opened
5 years ago
0
Save/load whole data session
#375
nuno-agostinho
opened
5 years ago
0
Add number of genes to the PSI table summary
#374
nuno-agostinho
opened
5 years ago
0
Perform dimensionality reduction with matrixes of one column/row crashes the app
#373
nuno-agostinho
opened
5 years ago
0
Do not automatically update data table viewer based on selected columns
#372
nuno-agostinho
opened
5 years ago
0
Add/load new datasets in data viewer for selected data category
#371
nuno-agostinho
opened
5 years ago
0
Remove filepath from certain field input elements
#370
nuno-agostinho
opened
5 years ago
0
Fix bug to allow folder selection in Windows
#369
nuno-agostinho
closed
3 years ago
1
Gene expression plots
#368
nuno-agostinho
closed
5 years ago
1
Remove non-exported functions from the reference manual
#367
nuno-agostinho
closed
5 years ago
1
Update citation link
#366
nuno-agostinho
closed
6 years ago
0
Version 1.6.2
#365
nuno-agostinho
closed
6 years ago
0
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