nvaldivi / ogms

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adverse events #29

Open GoogleCodeExporter opened 8 years ago

GoogleCodeExporter commented 8 years ago
The Vaccine ontology tries to represent adverse events. I believe OGMS should 
include definitions 
for adverse events in a general sense, and possibly in legal senses as defined 
by various influential 
health authorities such as the FDA.

The below links to some definitions used in the regulations

http://www.accessdata.fda.gov/scripts/cdrh/cfdocs/cfcfr/CFRSearch.cfm?fr=314.80
  Adverse drug experience
  Disability
  Life-threatening adverse drug experience
  Serious adverse drug experience
  Unexpected adverse drug experience

Original issue reported on code.google.com by alanruttenberg@gmail.com on 12 Sep 2009 at 9:21

GoogleCodeExporter commented 8 years ago
COSTART (now defunct, replaced by proprietary MedDRA) was a terminology for 
adverse events. You can see the 
term list by going to 
http://hedwig.mgh.harvard.edu/biostatistics/files/costart.html and clicking on 
"Show all 
terms"

Original comment by alanruttenberg@gmail.com on 12 Sep 2009 at 11:29

GoogleCodeExporter commented 8 years ago
Also see Common Terminology Criteria for Adverse Events
https://webapps.ctep.nci.nih.gov/webobjs/ctc/webhelp/welcome_to_ctcae.htm
http://ctep.cancer.gov/protocolDevelopment/electronic_applications/docs/ctcaev3.
pdf

There's a v4. All downloadable, including OWL version

http://evs.nci.nih.gov/ftp1/CTCAE/About.html

Original comment by alanruttenberg@gmail.com on 13 Sep 2009 at 12:02

GoogleCodeExporter commented 8 years ago
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GoogleCodeExporter commented 8 years ago
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GoogleCodeExporter commented 8 years ago
There's also Werner's paper: <a
href=http://www.referent-tracking.com/RTU/sendfile/?file=CeustersFOIS20081NEW-VE
RSION.pdf>Introducing
Realist Ontology for the
Representation of Adverse Events</a> 

In it, he argues that the common usage of the term 'adverse event' refers to a
defined class and not a universal.
There's also Werner's paper:
http://www.referent-tracking.com/RTU/sendfile/?file=CeustersFOIS20081NEW-VERSION
.pdf

In it, he argues that the common usage of the term 'adverse event' refers to a
defined class and not a universal.

Original comment by hoga...@gmail.com on 25 Sep 2009 at 8:21

GoogleCodeExporter commented 8 years ago
With a follow up here: http://www.referent-tracking.com/RTU/sendfile/?
file=CeustersMIE2009paper.pdf

We give there an analysis of the ReMINE definition for adverse agent which I am 
not in 
favor of, but if people want it that way, so be it. The paper shows that even 
with such 
definitions, an ontological adequate interpretation can be given.

Original comment by seannos.style@gmail.com on 26 Sep 2009 at 9:30