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nvelden / geneviewer

An R package designed for drawing gene arrow maps
https://nvelden.github.io/geneviewer/
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Error in GC_links #2

Closed shengqiangJ closed 4 months ago

shengqiangJ commented 5 months ago

I ran the code using the sample file and was able to generate gene track graphics, but it did not connect the genes. NO error generated. Is there a solution?

here is my code:

BlastP_results_functions <- left_join(BlastP_results, BGC0000055_info, by = dplyr::join_by(BlastP == protein_id ) ) GC_chart( data = BlastP_results_functions, cluster = "cluster", group = "Functions", strand = "strand", height = "600px" ) %>% GC_labels(label = "Gene", cluster = 1) %>% GC_links(group = "BlastP", identity = TRUE,show_links = TRUE) %>%
GC_clusterLabel() %>% GC_legend(TRUE)

nvelden commented 5 months ago

Did you try with the latest version on Github? I am still actively developing the package so older versions might not work anymore for some of the tutorials.