without segmentation path

nyukat / GMIC

An interpretable classifier for high-resolution breast cancer screening images utilizing weakly supervised localization

https://doi.org/10.1016/j.media.2020.101908

GNU Affero General Public License v3.0

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without segmentation path #6

Closed ankitdata closed 4 years ago

ankitdata commented 4 years ago

hi,

How i can run the model without segmentation path and segmentation folder inside sample_data I have cropped images and i want visualization only. Is it possible ?

seyiqi commented 4 years ago

Yes. You can do so by replacing the benign_seg and malignant_seg in this line: https://github.com/nyukat/GMIC/blob/master/src/scripts/run_model.py#L191 with zero matrices that are exactly the same shapes with your input images.