nyuvis / patient-viz

Visualization of electronic medical records or other sequence event data.
MIT License
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Does this work on other dialects of CDM or just Postgres? #53

Open jduke99 opened 8 years ago

JosuaKrause commented 8 years ago

I'm using the python SQLAlchemy library for accessing the CDM. The library is db-engine agnostic and I can add an option for users to choose a different one than Postgres when setting up. Before that, the db-access is currently set up here: https://github.com/nyuvis/patient-viz/blob/master/omop.py#L58 A list of supported engines can be found here: http://docs.sqlalchemy.org/en/latest/core/engines.html

jduke99 commented 8 years ago

I will check out SQLAlchemy,but for working with the OHDSI network CDMs, you'd want to use SQLRender (https://github.com/OHDSI/SqlRender).