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o-william-white / skim2mito

A snakemake pipeline for the batch assembly, annotation, and phylogenetic analysis of mitochondrial genomes from genome skims
MIT License
7 stars 5 forks source link

fastp trimming #16

Closed bwprice closed 6 months ago

bwprice commented 6 months ago

suggest adding the poly-g trimming back. I don't think it will impact non-novaseq runs, if anyone is doing them :)

fastp settings

o-william-white commented 6 months ago

Done :)