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o2r-project / o2r-meta

Metadata toolsuite for an extract-map-validate workflow supporting reproducible research
Apache License 2.0
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Recognize .txt input files #109

Closed MarkusKonk closed 4 years ago

MarkusKonk commented 5 years ago

So far, the service does not recognize .txt input files loaded in the main.Rmd file. It would be nice if these files could also go to metadata field "inputfiles". For an example, see "A space–time statistical climate model for hurricane intensification in the North Atlantic basin" which loads txt files in line 2385 and 2413. Once this done we can implement the UI to show the data.

MarkusKonk commented 4 years ago

Same here: https://github.com/o2r-project/erc-examples/tree/bindings/ERC/Finished/INSYDE and here: https://github.com/o2r-project/erc-examples/tree/bindings/ERC/Finished/tidy_data Link to spacetime: https://github.com/o2r-project/erc-examples/tree/bindings/ERC/Finished/Spacetime_climate_model

MarkusKonk commented 4 years ago

Update: Changing the o2r-meta version in the docker-compose to "latest" solves the issues, except the one from tidy data: raw <- read.fwf2("weather.txt", cols) is not yet considered

MarkusKonk commented 4 years ago

Solved in https://github.com/o2r-project/o2r-meta/commit/faba98cb84915f12d407ade2a1e57abc691780e4