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obi-ontology / obi

The Ontology for Biomedical Investigations
http://obi-ontology.org
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NTR: Giemsa stain assay #1093

Closed zhengj2007 closed 4 years ago

zhengj2007 commented 4 years ago
Name Value
Label Giemsa stain assay
Definition An assay that uses a Giemsa stain to characterize cells. Examples of usge: cytogenetics; the histopathological diagnosis of malaria and other parasites; differentiate nuclear and cytoplasmic morphology of the various blood cells like platelets, RBCs, WBCs
Definition source https://microbeonline.com/giemsa-stain-principle-procedure-and-results/
Parent OBI_0000070 assay

Notes: do we need to add Giemsa stain as a reagent in OBI?

cstoeckert commented 4 years ago

Discussed on Dec. 16, 2019. Need to add Giemsa stain. Put in assay template. A type of imaging assay (possibly microscopy assay).

zhengj2007 commented 4 years ago

Discussed on Jan 27, 2020.

Need to add device, microscopy, and has_part process imaging assay.

zhengj2007 commented 4 years ago

Added following information in assay template: assays.tsv

Name Value
label Giemsa stain assay
definition An assay that uses a Giemsa stain to characterize cells.
example of usage Cytogenetics; the histopathological diagnosis of malaria and other parasites; differentiate nuclear and cytoplasmic morphology of the various blood cells like platelets, RBCs, WBCs
term editor Jie Zheng|Chris Stoeckert
ontology term requester VEuPathDB
term tracker item https://github.com/obi-ontology/obi/issues/1093
logical type subclass
parent class assay
detection technique  imaging assay
evaluant cell
device microscope

Notes: ID is not assigned to the term.