NTR: data items - gene detection output

[cmrn-rhi]

Gene Detection Output Terms

• ROBOT table new term requests (basic template, data item specific template unavailable at this time)
• GenEpiO ID (temporary) and Curation Notes annotations are for curation work and should be removed prior to ROBOT integration.
• Have had an initial review by OBI curator(s), CIDGOH (requestee) curators need to:
  • [x] review definitions
  • [x] address red text

ROBOT table URL (I#1579 tab): https://docs.google.com/spreadsheets/d/1SiVgFDy9jOoFIhywvLjYLMBLqJsZ0B9An9170RYpQRM/edit#gid=2146269079&range=A15

ontology ID	label
OBI:0002874	sequence file name
OBI:0002875	contig number identifier
OBI:0002876	genomic orientation
OBI:0002877	gene symbol
OBI:0002878	gene name
OBI:0002880	breadth of coverage percentage
OBI:0002881	breadth of coverage ratio
OBI:0002882	sequence identity percentage
OBI:0002883	reference database name
OBI:0003499	reference sequence
OBI:0003500	accession number
OBI:0002885	reference sequence accession identifier
OBI:0002886	sequence length measurement datum
OBI:0002887	reference sequence length measurement datum
OBI:0002888	reference gene sequence length datum
OBI:0002889	reference protein sequence length datum
OBI:0002890	input sequence length measurement datum
OBI:0002891	input gene sequence length measurement datum
OBI:0002892	input protein sequence length measurement datum

@ddooley

[cmrn-rhi]

CIDGOH team have re-reviewed these items and addressed the red text. We removed the ROBOT request for "genome coverage" as it appears to have been added as http://purl.obolibrary.org/obo/OBI_0001939. We will put any requests regarding this term in a separate issue.

Ready for OBI to take over from here.