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The Ontology for Biomedical Investigations
http://obi-ontology.org
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NTRs #707

Open obi-bot opened 9 years ago

obi-bot commented 9 years ago

Hi OBI,

I'd like to submit a request for multiple new terms. The requested terms are in the attached file. Please let me know if you need additional info.

Thanks, Janos

Reported by: jdemetert

Original Ticket: obi/obi-terms/723

obi-bot commented 9 years ago

Original comment by: zhengj2007

obi-bot commented 9 years ago

Dear Janos,

Thanks for your submission. Dr. Chris Stoeckert and I will review your submission and may contact you directly by email if we have some questions.

Jie

Original comment by: zhengj2007

obi-bot commented 9 years ago

Hi OBI developers,

I was looking at ticket 723 submitted by Janos, and noticed the following 2 issues:

1/ Chromosome Conformation Capture Assay /Circularized Chromosome Conformation Capture Assay

I remember creating those when working with Marcus Chibucos on integrating with ECO. We used a qTT for it but the classes are absent from OBI. I'll check the logs to see when these have been lost.

2/ Mass Spectrometry Assay , 2D DIGE, SDS-PAGE:

We may want to liaise/reach out PSI-MS here as this is their scope, and they provide a fairly extensive CV (not in OWL though).

some requested terms have been deprecated by PSI-MS

3/some other terms are already defined in CHMO

sodium dodecyl sulfate polyacrylamide gel electrophoresis - Chemical Methods Ontology (CHMO) http://purl.obolibrary.org/obo/CHMO_0001027

difference gel electrophoresis - Chemical Methods Ontology (CHMO) http://purl.obolibrary.org/obo/CHMO_0001028

and could be slurped straight in (Colin did a great job)

Cheers

Philippe

PS: Janos, I will get back to you as soon as I have a moment! best

On 08/12/2014 18:03, jzheng wrote:

  • assigned_to: jzheng
  • Comment:

Dear Janos,

Thanks for your submission. Dr. Chris Stoeckert and I will review your submission and may contact you directly by email if we have some questions.

Jie

[obi-terms:#723] http://sourceforge.net/p/obi/obi-terms/723 NTRs

Status: open Group: general Created: Wed Nov 26, 2014 06:05 PM UTC by Janos Demeter Last Updated: Wed Nov 26, 2014 06:05 PM UTC Owner: jzheng

Hi OBI,

I'd like to submit a request for multiple new terms. The requested terms are in the attached file. Please let me know if you need additional info.

Thanks, Janos

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Original comment by: proccaserra