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obiba / genobyte

GenoByte is a Java API for storing and querying data resulting from the aggregation of high-throughput genotyping experiments across many subjects.
GNU General Public License v3.0
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GEN-35: Filtering SNPs in Mendel report does not filter test count #20

Closed ymarcon closed 6 years ago

ymarcon commented 16 years ago

Jira issue originally created by user @plaflamme:

From the mailing list:

I've tested the mendel report in the 1.4.2 version. I don't want to be picky, but it seems that the problem is only halfway resolved in that the number of reported errors is now indeed affected by the specified query, whereas the number of tests is not. Say that you have one child and two assays A and B. B has an error in the inheritance pattern. The query q1 selects only assay A. For version 1.4.1 both specifying and not specifying the query q1 for the mendel report would give 1 errors and 2 tests. Now for version 1.4.2, it seems that specifying q1 will give 0 errors and 2 tests. Wouldn't 0 errors and 1 tests be more correct?

        Regards,

        Mats
ymarcon commented 16 years ago

Issue was closed with resolution "Fixed"