Move GraphBuilder and all its logic from ddr

[c71n93]

Closes #34

---

PR-Codex overview

This PR focuses on updating dependencies and refactoring package structure in the codebase.

Detailed summary

• Deleted GraphBuilder.ktpom.xml file
• Added commons-lang3 dependency
• Updated package imports for GraphBuilder and related classes
• Updated package imports for test classes
• Updated package imports for classes related to attributes and nodes
• Refactored package structure for DeogGraph and Nodes classes
• Updated package imports for AttributesSetter, ClosedCycleProcessor, InnerPropagator, and CondAttributesSetter classes

The following files were skipped due to too many changes: src/main/kotlin/org/objectionary/deog/steps/CondAttributesSetter.kt, src/main/kotlin/org/objectionary/deog/AttributesUtil.kt, src/main/kotlin/org/objectionary/deog/graph/GraphBuilder.kt

✨ Ask PR-Codex anything about this PR by commenting with /codex {your question}

[c71n93]

@Graur could you check this one, please?

[c71n93]

@yegor256 please take a look

[yegor256]

@rultor merge

[rultor]

@rultor merge

@yegor256 OK, I'll try to merge now. You can check the progress of the merge here

[rultor]

@rultor merge

@yegor256 Done! FYI, the full log is here (took me 4min)