Define JSON schema that bundles CCN2 components - Githubissues

obophenotype / CCN2

Developing a successor to the CCN taxonomy system

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Define JSON schema that bundles CCN2 components #12

Open dosumis opened 1 year ago

dosumis commented 1 year ago

JSON that schema should define 4 objects:

taxonomy - key value pairs defined in https://github.com/obophenotype/CCN2/blob/main/doc/CCN2_table_doc.md#taxonomy-metadata-table
cross_taxonomy_mapping - key value pairs defined in https://github.com/obophenotype/CCN2/blob/main/doc/CCN2_table_doc.md#cross-taxonomy-mapping-table
location_mapping - key value pairs defined in https://github.com/obophenotype/CCN2/blob/main/doc/CCN2_table_doc.md#location-mapping-table
cell_set_accession_to_cell_mapping - modelled on current csv

hkir-dev commented 1 year ago

Development started in here: https://github.com/brain-bican/CCN2/blob/main/src/schema/schema2.json

Which csv are you mentioning here:

cell_set_accession_to_cell_mapping - modelled on current csv