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[Fallopian tube] Unmapped CL terms #41

Closed anitacaron closed 1 year ago

anitacaron commented 2 years ago

From the report listing CT terms without IDS: 2022-09-20 Release

Some of the CL names in the report already exist in Cell Ontology:

N Terminal AS/ID Terminal AS/label CL Name CL term OLS link Comment
1 intramural segment of Fallopian tube Fibroblast CL:0000057 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000057
2 intramural segment of Fallopian tube fibroblast-mesenchymal cell The article makes reference to a "network of fibroblast-mesenchymal cells". My understanding is that the lamina propria is composed of fibroblasts AND mesenchymal cells, and not a fibroblast-mesenchymal cell. I suggest using the term "mesenchymal cell" CL: 0008019
3 intramural segment of Fallopian tube macrophage CL:0000235 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000235
4 intramural segment of Fallopian tube CD8+ T-cells CL:0000625 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000625
5 intramural segment of Fallopian tube Natural killer cell CL:0000623 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000623
6 intramural segment of Fallopian tube CD4+ T-cell CL:0000624 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000624
7 intramural segment of Fallopian tube Langerhans cell CL:0000453 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000453
8 intramural segment of Fallopian tube monocyte CL:0000576 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000576
9 intramural segment of Fallopian tube dendritic cell CL:0000451 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000451
10 intramural segment of Fallopian tube mast cell CL:0000097 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000097
11 intramural segment of Fallopian tube B cell CL:0000236 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000236
12 intramural segment of Fallopian tube plasma cell CL:0000786 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000786
13 intramural segment of Fallopian tube neutrophil CL:0000775 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000775
14 intramural segment of Fallopian tube Endothelial cell CL:0000115 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000115
15 UBERON:0016632 isthmus of Fallopian tube Fibroblast CL:0000057 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000057
16 UBERON:0016632 isthmus of Fallopian tube fibroblast-mesenchymal cell
17 UBERON:0016632 isthmus of Fallopian tube macrophage CL:0000235 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000235
18 UBERON:0016632 isthmus of Fallopian tube CD8+ T-cells CL:0000625 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000625
19 UBERON:0016632 isthmus of Fallopian tube Natural killer cell CL:0000623 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000623
20 UBERON:0016632 isthmus of Fallopian tube CD4+ T-cell CL:0000624 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000624
21 UBERON:0016632 isthmus of Fallopian tube Langerhans cell CL:0000453 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000453
22 UBERON:0016632 isthmus of Fallopian tube monocyte CL:0000576 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000576
23 UBERON:0016632 isthmus of Fallopian tube dendritic cell CL:0000451 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000451
24 UBERON:0016632 isthmus of Fallopian tube mast cell CL:0000097 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000097
25 UBERON:0016632 isthmus of Fallopian tube B cell CL:0000236 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000236
26 UBERON:0016632 isthmus of Fallopian tube plasma cell CL:0000786 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000786
27 UBERON:0016632 isthmus of Fallopian tube neutrophil CL:0000775 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000775
28 UBERON:0016632 isthmus of Fallopian tube Endothelial cell CL:0000115 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000115
29 UBERON:0012648 ampulla of Fallopian tube Fibroblast CL:0000057 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000057
30 UBERON:0012648 ampulla of Fallopian tube fibroblast-mesenchymal cell
31 UBERON:0012648 ampulla of Fallopian tube macrophage CL:0000235 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000235
32 UBERON:0012648 ampulla of Fallopian tube CD8+ T-cells CL:0000625 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000625
33 UBERON:0012648 ampulla of Fallopian tube Natural killer cell CL:0000623 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000623
34 UBERON:0012648 ampulla of Fallopian tube CD4+ T-cell CL:0000624 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000624
35 UBERON:0012648 ampulla of Fallopian tube Langerhans cell CL:0000453 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000453
36 UBERON:0012648 ampulla of Fallopian tube monocyte CL:0000576 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000576
37 UBERON:0012648 ampulla of Fallopian tube dendritic cell CL:0000451 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000451
38 UBERON:0012648 ampulla of Fallopian tube mast cell CL:0000097 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000097
39 UBERON:0012648 ampulla of Fallopian tube B cell CL:0000236 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000236
40 UBERON:0012648 ampulla of Fallopian tube plasma cell CL:0000786 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000786
41 UBERON:0012648 ampulla of Fallopian tube neutrophil CL:0000775 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000775
42 UBERON:0012648 ampulla of Fallopian tube Endothelial cell CL:0000115 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000115
43 UBERON:0003984 infundibulum of Fallopian tube Fibroblast CL:0000057 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000057
44 UBERON:0003984 infundibulum of Fallopian tube fibroblast-mesenchymal cell
45 UBERON:0003984 infundibulum of Fallopian tube macrophage CL:0000235 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000235
46 UBERON:0003984 infundibulum of Fallopian tube CD8+ T-cells CL:0000625 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000625
47 UBERON:0003984 infundibulum of Fallopian tube Natural killer cell CL:0000623 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000623
48 UBERON:0003984 infundibulum of Fallopian tube CD4+ T-cell CL:0000624 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000624
49 UBERON:0003984 infundibulum of Fallopian tube Langerhans cell CL:0000453 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000453
50 UBERON:0003984 infundibulum of Fallopian tube monocyte CL:0000576 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000576
51 UBERON:0003984 infundibulum of Fallopian tube dendritic cell CL:0000451 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000451
52 UBERON:0003984 infundibulum of Fallopian tube mast cell CL:0000097 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000097
53 UBERON:0003984 infundibulum of Fallopian tube B cell CL:0000236 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000236
54 UBERON:0003984 infundibulum of Fallopian tube plasma cell CL:0000786 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000786
55 UBERON:0003984 infundibulum of Fallopian tube neutrophil CL:0000775 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000775
56 UBERON:0003984 infundibulum of Fallopian tube Endothelial cell CL:0000115 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000115
57 UBERON:0012331 mesosalpinx epithelial cell CL:0000066 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000066
58 UBERON:8410010 fimbria of Fallopian tube Fibroblast CL:0000057 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000057
59 UBERON:8410010 fimbria of Fallopian tube fibroblast-mesenchymal cell
60 UBERON:8410010 fimbria of Fallopian tube macrophage CL:0000235 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000235
61 UBERON:8410010 fimbria of Fallopian tube CD8+ T-cells CL:0000625 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000625
62 UBERON:8410010 fimbria of Fallopian tube Natural killer cell CL:0000623 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000623
63 UBERON:8410010 fimbria of Fallopian tube CD4+ T-cell CL:0000624 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000624
64 UBERON:8410010 fimbria of Fallopian tube Langerhans cell CL:0000453 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000453
65 UBERON:8410010 fimbria of Fallopian tube monocyte CL:0000576 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000576
66 UBERON:8410010 fimbria of Fallopian tube dendritic cell CL:0000451 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000451
67 UBERON:8410010 fimbria of Fallopian tube mast cell CL:0000097 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000097
68 UBERON:8410010 fimbria of Fallopian tube B cell CL:0000236 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000236
69 UBERON:8410010 fimbria of Fallopian tube plasma cell CL:0000786 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000786
70 UBERON:8410010 fimbria of Fallopian tube neutrophil CL:0000775 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000775
71 UBERON:8410010 fimbria of Fallopian tube Endothelial cell CL:0000115 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000115
72 UBERON:0004804 oviduct epithelium intercalary cell CL:4033014 New term Synonym of peg cell
73 UBERON:0007589 ciliated columnar oviduct epithelium ciliated epithelial cell CL:0000067 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000067
74 UBERON:0007590 cuboidal oviduct epithelium secretory epithelial cell CL:4030006 https://www.ebi.ac.uk/ols/ontologies/cl/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_4030006
anitacaron commented 1 year ago

UPDATE:

The last report listing CT terms without IDS: 2023-10-25 Release there's only one truly new term, so all terms were mapped.