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obophenotype / asct-b_validation

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Relationship in table is reversed: Uberon has thymus subcapsular epithelium subClassOf thymus epithelium #44

Closed anitacaron closed 2 years ago

anitacaron commented 2 years ago

From 2022-09-20 Release:

row s slabel user_slabel o olabel user_olabel
61 UBERON:0003846 thymus epithelium thymus epithelium UBERON:0006936 thymus subcapsular epithelium thymus subcapsular epithelium

From ASCT+B Thymus 1.3:

row AS/4 AS/4/LABEL AS/4/ID AS/5 AS/5/LABEL AS/5/ID
28 thymus subcapsular epithelium thymus subcapsular epithelium UBERON:0006936 thymus epithelium thymus epithelium UBERON:0003846

The order in the ASCT+B table is reversed. The left-side term (AS/4) should always be on the upper level than the right-side term (AS/5).

It should be:

row AS/4 AS/4/LABEL AS/4/ID AS/5 AS/5/LABEL AS/5/ID
28 thymus epithelium thymus epithelium UBERON:0003846 thymus subcapsular epithelium thymus subcapsular epithelium UBERON:0006936
emquardokus commented 2 years ago

@anitacaron fixed the order for the one instance, but there were several instances of thymus subcapsular epithelium where thymus epithelium needed to come before it, but wasn't there; added AS/7 columns to accommodate fixing all instances the same way. Rows 28-36 edited to fix issue. done.