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obophenotype / bio-attribute-ontology

source files for OBA (Ontology of Biological Attributes)
https://obophenotype.github.io/bio-attribute-ontology
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Add EFO volume terms for EFO-OBA mapping #160

Open ar-ibrahim opened 2 years ago

ar-ibrahim commented 2 years ago

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subject_id | subject_label | quality | quality_label | attribute | attribute_label -- | -- | -- | -- | -- | -- EFO:0010326 | precuneus cortex volume quality@en | PATO:0000918 | volume | UBERON:0006093 | precuneus cortex EFO:0009405 | parasubiculum volume | PATO:0000918 | volume | UBERON:0004683 | parasubiculum EFO:0600045 | pancreas volume | PATO:0000918 | volume | UBERON:0001264 | pancreas EFO:0010330 | superior parietal cortex volume quality@en | PATO:0000918 | volume | UBERON:0006094 | superior parietal cortex EFO:0010317 | paracentral lobule volume quality@en | PATO:0000918 | volume | UBERON:0035933 | paracentral lobule EFO:0006930 | brain volume quality | PATO:0000918 | volume | UBERON:0000955 | brain EFO:0010335 | third ventricle volume quality@en | PATO:0000918 | volume | UBERON:0002286 | third ventricle EFO:0010304 | frontal pole volume quality@en | PATO:0000918 | volume | UBERON:0002795 | frontal pole EFO:0010147 | temporal lobe volume quality | PATO:0000918 | volume | UBERON:0001871 | temporal lobe EFO:0010321 | pars triangularis volume quality@en | PATO:0000918 | volume | UBERON:0002629 | pars triangularis EFO:0010146 | parietal lobe volume quality | PATO:0000918 | volume | UBERON:0001872 | parietal lobe EFO:0600044 | kidney volume | PATO:0000918 | volume | UBERON:0002113 | kidney EFO:0006932 | putamen volume | PATO:0000918 | volume | UBERON:0001874 | putamen EFO:0010327 | rostral anterior cingulate cortex volume quality@en | PATO:0000918 | volume | UBERON:0022438 | rostral anterior cingulate cortex EFO:0010313 | limbic lobe volume quality@en | PATO:0000918 | volume | UBERON:0002600 | limbic lobe EFO:0010331 | superior temporal gyrus volume quality@en | PATO:0000918 | volume | UBERON:0002769 | superior temporal gyrus EFO:0006931 | nucleus accumbens volume | PATO:0000918 | volume | UBERON:0001882 | nucleus accumbens EFO:0010605 | brain stem volume quality@en | PATO:0000918 | volume | UBERON:0002298 | brain stem EFO:0010318 | parahippocampal gyrus volume quality@en | PATO:0000918 | volume | UBERON:0002973 | parahippocampal gyrus EFO:0010322 | pericalcarine cortex volume quality@en | PATO:0000918 | volume | UBERON:0022534 | pericalcarine cortex EFO:0009399 | subiculum volume | PATO:0000918 | volume | UBERON:0002191 | subiculum EFO:0010294 | cingulate cortex volume quality@en | PATO:0000918 | volume | UBERON:0003027 | cingulate cortex EFO:0010328 | rostral middle frontal gyrus volume quality@en | PATO:0000918 | volume | UBERON:0006446 | rostral middle frontal gyrus EFO:0006933 | pallidum volume | PATO:0000918 | volume | UBERON:0006514 | pallidum EFO:0010301 | cuneus cortex volume quality@en | PATO:0000918 | volume | UBERON:0006092 | cuneus cortex EFO:0010314 | lingual gyrus volume quality@en | PATO:0000918 | volume | UBERON:0002943 | lingual gyrus EFO:0010332 | supramarginal gyrus volume quality@en | PATO:0000918 | volume | UBERON:0002688 | supramarginal gyrus EFO:0010319 | pars opercularis volume quality@en | PATO:0000918 | volume | UBERON:0002980 | pars opercularis EFO:0010323 | postcentral gyrus volume quality@en | PATO:0000918 | volume | UBERON:0002581 | postcentral gyrus EFO:0600048 | liver volume | PATO:0000918 | volume | UBERON:0002107 | liver EFO:0006934 | amygdala volume | PATO:0000918 | volume | UBERON:0001876 | amygdala EFO:0010329 | superior frontal gyrus volume quality@en | PATO:0000918 | volume | UBERON:0002661 | superior frontal gyrus EFO:0010302 | entorhinal cortex volume quality@en | PATO:0000918 | volume | UBERON:0002728 | entorhinal cortex EFO:0010315 | medial orbital frontal cortex volume quality@en | PATO:0000918 | volume | UBERON:0022352 | medial orbital frontal cortex EFO:0010324 | posterior cingulate cortex volume quality@en | PATO:0000918 | volume | UBERON:0022353 | posterior cingulate cortex EFO:0010144 | frontal lobe volume quality | PATO:0000918 | volume | UBERON:0016525 | frontal lobe EFO:0010307 | inferior parietal cortex volume quality@en | PATO:0000918 | volume | UBERON:0006088 | inferior parietal cortex EFO:0010291 | cerebellar cortex volume quality@en | PATO:0000918 | volume | UBERON:0002129 | cerebellar cortex EFO:0010325 | precentral gyrus volume quality@en | PATO:0000918 | volume | UBERON:0002703 | precentral gyrus EFO:0009404 | hippocampal fissure volume | PATO:0000918 | volume | UBERON:0002899 | hippocampal fissure EFO:0010316 | middle temporal gyrus volume quality@en | PATO:0000918 | volume | UBERON:0002771 | middle temporal gyrus EFO:0010309 | insular cortex volume quality@en | PATO:0000918 | volume | UBERON:0034891 | insular cortex EFO:0010334 | temporal pole volume quality@en | PATO:0000918 | volume | UBERON:0002576 | temporal pole EFO:0010303 | fourth ventricle volume quality@en | PATO:0000918 | volume | UBERON:0002422 | fourth ventricle EFO:0010308 | inferior temporal gyrus volume quality@en | PATO:0000918 | volume | UBERON:0002751 | inferior temporal gyrus EFO:0009400 | presubiculum volume | PATO:0000918 | volume | UBERON:0001953 | presubiculum EFO:0009397 | hippocampus molecular layer volume | PATO:0000918 | volume | UBERON:0005368 | hippocampus molecular layer EFO:0010292 | cerebral cortex volume quality@en | PATO:0000918 | volume | UBERON:0000956 | cerebral cortex EFO:0010145 | occipital lobe volume quality | PATO:0000918 | volume | UBERON:0002021 | occipital lobe EFO:0004913 | lentiform nucleus volume | PATO:0000918 | volume | UBERON:0002263 | lentiform nucleus

rays22 commented 1 year ago

@ar-ibrahim , please