Track clinical measurement mappings

[rays22]

Track the clinical measurement-OBA mapping here.

Background

There at least three different categories where the targeted laboratory terminology types fit.

1. Terminology that map to existing OBA trait terms. For example, Body weight skos:exactMatch OBA:VT0001259 body mass
2. Terminology that map to new OBA trait terms to be created. For example, Consistency of Stool
3. Terminology that are not in scope for OBA.
   • Information artefact codes For example, Observation interpretation, Referral lab test method
   • Features of abnormal or other phenotypes covered by HP For example, Bacteria identified in Blood by Culture skos:relatedMatch HP:0031864 Bacteremia
   • Other abnormal physiology, symptom, pathology related measurements For example, Pain severity Wong-Baker FACES pain rating scale, Acanthamoeba sp identified in Specimen by Organism specific culture
   • Genotype related terminology For example, COL3A1 gene targeted mutation analysis in Blood or Tissue by Molecular genetics method

Tasks

• [ ] indicate which of the targeted terms you are curating in the linked gsheet table Table headings:

• [ ] for any new OBA term, link the related OBA ticket

[rays22]

Hi @ar-ibrahim , If you would like to get involved in the LOINC-OBA mapping project, please pick some terms to curate from the linked gsheet table and add your name to the rows you are curating to avoid any duplication of effort.