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obophenotype / cell-ontology

An ontology of cell types
https://obophenotype.github.io/cell-ontology/
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Terms for developing neurons in the hindbrain #2327

Open dosumis opened 5 months ago

dosumis commented 5 months ago

Most or all of these developing neurons from the hindbrain and spinal cord are missing from CL.

Grouping Cell type marker_gene_list References  
hindbrain and spinal neurons pA1 neural progenitor OLIG3, ATOH1 https://doi.org/10.3389/fncir.2017.00018 (MB);https://doi.org/10.1016/j.ydbio.2016.10.008 (LH)
hindbrain and spinal neurons pA2 neural progenitor OLIG3, NEUROG1 https://doi.org/10.3389/fncir.2017.00018 (MB);https://doi.org/10.1101/2022.04.27.489800 (SL)
hindbrain and spinal neurons pA3-4 neural progenitor OLIG3, PTF1A https://doi.org/10.3389/fncir.2017.00018 (MB)  
hindbrain and spinal neurons DA1 neuron LHX2, LHX9 https://doi.org/10.3389/fncir.2017.00018 (MB)  
hindbrain and spinal neurons DA3 neuron LBX1, TLX3, LMX1B https://doi.org/10.3389/fncir.2017.00018 (MB)  
hindbrain and spinal neurons DB1 neuron/ DL4 LHX1, LHX5, PAX2, LBX1 https://doi.org/10.3389/fncir.2017.00018 (MB)  
hindbrain and spinal neurons DL1 neuron BARHL1, BARHL2 https://doi.org/10.1242/dev.199711 (JB)  
hindbrain and spinal neurons DL2 neuron TLX3 https://doi.org/10.1242/dev.199711 (JB)  
hindbrain and spinal neurons DL3 neuron OTP https://doi.org/10.1242/dev.199711 (JB)  
hindbrain and spinal neurons DL5 neuron LMX1B, ASCL1 https://doi.org/10.1242/dev.199711 (JB)  
hindbrain and spinal neurons DL6 neuron/ dB4 DMRT3 https://doi.org/10.1242/dev.199711 (JB)  
hindbrain and spinal neurons p2 neural progenitor FOXN4, NKX6-1, VSX1 https://doi.org/10.1242/dev.199711 (JB);https://doi.org/10.3389/fnmol.2016.00145
hindbrain and spinal neurons pMNv neural progenitor NKX2-2, NKX6-1 https://doi.org/10.3389/fncir.2017.00018 (MB)  
hindbrain and spinal neurons V0 interneuron LHX1, LHX5, PAX2, EVX1, EVX2 https://doi.org/10.3389/fncir.2017.00018 (MB);https://doi.org/10.1242/dev.199711 (JB)
hindbrain and spinal neurons V1 interneuron LHX1, LHX5, PAX2, EN1 https://doi.org/10.3389/fncir.2017.00018 (MB);https://doi.org/10.1242/dev.199711 (JB)
hindbrain and spinal neurons V2A-B interneuron LHX3, VSX2, SOX14, GATA2, GATA3 https://doi.org/10.1242/dev.199711 (JB)  
hindbrain and spinal neurons V3 interneuron SIM1, NKX2-2 https://doi.org/10.1242/dev.199711 (JB)  
         
dosumis commented 5 months ago

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