Open GoogleCodeExporter opened 9 years ago
Original comment by dosu...@gmail.com
on 23 Apr 2014 at 11:43
Maybe the property values "start_mbp", "end_mbp", etc, are what you need? They
are already present in the ontology.
Original comment by frederic...@gmail.com
on 24 Apr 2014 at 11:51
Hadn't noticed these. Looking at the latest OWL version
(http://purl.obolibrary.org/obo/mmusdv/releases/2014-04-10/mmusdv.owl), they
appear to be annotation properties. To be used in reasoning, they would need
to be data properties. For this to work, I think we'd need a single data
property for recording the age range for each stage - rather than separate ones
for start and end stage.
Original comment by dosu...@gmail.com
on 24 Apr 2014 at 1:59
Then I let this discussion to Chris :p
Original comment by frederic...@gmail.com
on 24 Apr 2014 at 2:09
maybe to close? sounds obsolete? @cmungall
Not obsolete in that these are still not data properties. If they were, I could use them for temporal reasoning-type queries.
No longer urgent for me though.
@dosumis sorry, I thought it is 'data properties' when I see stuff like
property_value: start_ypb "12.0" xsd:float
Looks like OBO.
So I guess the master is still OBO? In that case, we'd need a macro-expansion specified to make the data properties in OWL. I can specify that on the annotation property. Is this AP specific to mmusdv or is it inherited from elsewhere?
I let @cmungall or @fbastian answer
The APs are currently specific to each ontology as some of the species do it differently, but we should probably unify and get these into RO. We'd probably have to start making some semantic commitments which we've deferred on so far
Original issue reported on code.google.com by
dosu...@gmail.com
on 23 Apr 2014 at 11:42