@matentzn I need to add new CHEBI terms in order to complete EQs of 'circulating compounds'.
I tried to follow what suggested in obophenotype/upheno#956 . I added terms to the chebi.txt and ran sh run.sh make refresh-merged.
The import dates changed, but nothing else did. I tried to also then add manually to protoge and then run it, and that didn't work.
@matentzn I need to add new CHEBI terms in order to complete EQs of 'circulating compounds'. I tried to follow what suggested in obophenotype/upheno#956 . I added terms to the chebi.txt and ran sh run.sh make refresh-merged.
The import dates changed, but nothing else did. I tried to also then add manually to protoge and then run it, and that didn't work.
I cannot add just the chebi number to the EQ.
Below is a list of terms required.
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CHEBI Label | CHEBI ID | Syn used in HP -- | -- | -- 3-methyl-2-oxobutanoate | CHEBI:11851 S-adenosyl-L-methionine | CHEBI:15414 2-oxoadipic acid | CHEBI:15753 arachidonic acid | CHEBI:15843 5,6-dihydrouracil | CHEBI:15901 5-oxoproline | CHEBI:16010 guanidinoacetic acid | CHEBI:16344 S-adenosyl-L-homocysteine | CHEBI:16680 guanosine | CHEBI:16750 Glutathione | CHEBI:16856 5-hydroxymethyluracil | CHEBI:16964 biliverdin | CHEBI:17033 D-glucitol 6-phosphate | CHEBI:17044 | sorbitol 5alpha-cholest-7-en-3beta-ol | CHEBI:17168 | lathosterol N(4)-(beta-N-acetyl-D-glucosaminyl)-L-asparagine | CHEBI:17261 3-(4-hydroxyphenyl)lactic acid | CHEBI:17385 | hydroxyphenyllactic acid inosine | CHEBI:17596 Octadecatrienoylcarnitine | CHEBI:176718 O-acylcarnitine | CHEBI:176911 N,N-dimethylglycine | CHEBI:17724 desmosterol | CHEBI:17737 thymidine | CHEBI:17748 thymine | CHEBI:17821 4-methyl-2-oxopentanoate | CHEBI:17865 Pipecolic acid | CHEBI:17964 4-hydroxyphenylacetic acid | CHEBI:18101 Manganese atom | CHEBI:18291 Argininosuccinic acid | CHEBI:184023 branched-chain keto acid anion | CHEBI:191201 7-Dehydrocholesterol 5,6-oxide | CHEBI:192164 N-acetyl-L-aspartic acid | CHEBI:21547 aconitic acid | CHEBI:22211 arabinitol | CHEBI:22605 deoxyuridine phosphate | CHEBI:23641 Homoarginine | CHEBI:24606 Hydroxybutyric acid | CHEBI:24684 succinate | CHEBI:26806 very long-chain fatty acid | CHEBI:27283 5,6-dihydrothymine | CHEBI:27468 sitosterol | CHEBI:27693 S-sulfo-L-cysteine | CHEBI:27891 isovaleric acid | CHEBI:28484 farnesol | CHEBI:28600 glycolate | CHEBI:29805 hexacosanoic acid | CHEBI:31009 O-phosphoserine | CHEBI:37712 L-alloisoleucine | CHEBI:43433 methionine S-oxide | CHEBI:49033 Dopa | CHEBI:49168 Fumarate salt | CHEBI:50921 pristanic acid | CHEBI:51340 all-cis-docosa-7,10,13,16-tetraenoic acid | CHEBI:53487 | Adrenal acid Homovanillic acid | CHEBI:545959 alpha-Neu5Ac-(2->3)-beta-D-Gal-(1->3)-[alpha-L-Fuc-(1->4)]-D-GlcNAc | CHEBI:61793 | carbohydrate antigen 19-9 Gly-Pro | CHEBI:70744 Lathosterone | CHEBI:71550 tiglylglycine | CHEBI:73018 N-nicotinoylglycine | CHEBI:7563 | nicotinurate O-dodecenoylcarnitin | CHEBI:86065 Pyridinoline | CHEBI:88539 Deoxypyridinoline | CHEBI:89510 suberic acid | CHEBI:9300 D-glyceric acid | CHEBI:32398