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obophenotype / mouse-anatomy-ontology

Ontologies for mouse anatomy and development
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Map relations to RO ids to be used in OWL translation. #125

Open balhoff opened 1 year ago

balhoff commented 1 year ago

This will make EMAPA more compatible with other OBO ontologies, by using relations from RO in its OWL file. This also eliminates problematic relation IRIs that don't resolve (see https://github.com/INCATools/ubergraph/issues/102).

matentzn commented 1 year ago

I would very much love to see this PR accepted!

tfhayamizu commented 1 year ago

@balhoff Sorry but it is not quite clear to me what this merge would entail. Specifically, what changes would be made to the EMAPA file itself, and what effect would this have on the OBO formatted file that our database uses?

balhoff commented 1 year ago

Hi @tfhayamizu, it would just add these xrefs to the OBO file: https://github.com/obophenotype/mouse-anatomy-ontology/pull/125/files

I wouldn't expect that to have much, if any, impact on your database, unless you're using an OWL parser.