terms to add - Githubissues

obophenotype / planarian-phenotype-ontology

Planarian Phenotype Ontology

6 stars 1 forks source link

Open srobb1 opened 4 years ago

srobb1 commented 4 years ago

[x] total loss of anatomical entity due to degeneration
[x] abnormal motility of whole organism
[x] decreased motility of whole organism
[x] presence of edema MP:edema
[x] inch worm like movement
[x] head/tail pinching. hourglass-shaped head/tail? does this work?
[ ] pinching along lateral epithelium
[x] epithelial ruffles
[x] bullet hole =? loss of pharynx
[x] patchy pigmentation. similar pattern to increased/decreased pigmentation? NTR?
[ ] increased fission rate
[ ] scrunched animal?
[ ] animal with extremely visible central nervous system
[x] animal and tissue lysis

srobb1 commented 4 years ago

edema

create and add edematousAnatomicalEntity similar to lesionedAnatomicalEntity?

ID	Name	Def
PLANP_0000803	tail edema	An abnormal accumulation of fluid in the tail.
PLANP_0000801	edema in animal	An abnormal accumulation of fluid in the whole organism.
PLANP_0000802	head edema	An abnormal accumulation of fluid in the head.

srobb1 commented 4 years ago

is 'wavyness of body' the same as ruffled?

ID	Name	Def
PLANP_0000796	epithelial ruffles	Any structural anomaly that causes epithelium to be ruffled shaped.

srobb1 commented 4 years ago

NCIT has lysis. Does this match with planarian lysis?

srobb1 commented 4 years ago

Patchy pigmentation term request

srobb1 commented 4 years ago

Lysis-lytic-lysed term request

srobb1 commented 4 years ago

absence due to degeneration

ID	Name	Def
PLANP_0000790	tail regression	Complete wasting (loss) of tail tissue that was once present.
PLANP_0000789	head regression	Complete wasting (loss) of head tissue that was once present.

srobb1 commented 4 years ago

Bullet holes:

Bullet holes are large circular lesions surrounded by accumulated pigment. They are nearly always on the midline near the pharynx.