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obophenotype / provisional_cell_ontology

Draft cell type definitions from data - candidates for inclusion in CL
Creative Commons Attribution 4.0 International
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[NTR-pcl] Upper FS Basket cell (Mus MOp) #40

Open shawntanzk opened 2 years ago

shawntanzk commented 2 years ago

Preferred term label: Upper fast-spiking basket Pvalb GABAergic interneuron of the primary motor cortex (Mus musculus)

Synonyms Upper FS BC PV MOp (Mus)

Definition (free text, please give PubMed ID in format PMID:XXXXXX) A Pvalb GABAergic cortical interneuron in upper L5 and L2/3 of the primary motor cortex that have strong layer-adapting morphology, classical L2/3 basket morphology in L2/3, and mostly large basket cell morphology in upper L5. They are Fast spiking with some showing delayed firing with large latency. PMID:26612957 PMID:18568015

Parent cell type term (check the hierarchy here https://www.ebi.ac.uk/ols/ontologies/cl): GABAergic interneuron

What is the anatomical structure that the cell is a part of? Please check Uberon: https://www.ebi.ac.uk/ols/ontologies/uberon http://purl.obolibrary.org/obo/UBERON_0001384 - Primary Motor Cortex *has some soma location, can specify layer

Your nano-attribution (ORCID)

Any additional notes or concerns subclass of Pvalb interneurons #868

shawntanzk commented 2 years ago

hold off till ephys stuff gets placed into PATO