Closed shawntanzk closed 2 years ago
Currently fixing issues by using sh run.sh make components/bdso-base-ext.owl prepare_release
to run a release which forces make to build bdso-base-ext first - this allows the importing of terms to work properly (sh run.sh make all_components prepare_release
should work too) - Nico mentioned that there are some technical issues that are more tricky to solve, but we can use this as a workaround for now
Currently there is some error:
robot --catalog catalog-v001.xml annotate -I "https://raw.githubusercontent.com/obophenotype/brain_data_standards_ontologies/pcl_migration/bdso-base-ext.owl" --ontology-iri http://purl.obolibrary.org/obo/pcl/components/bdso-base-ext.owl -o components/bdso-base-ext.owl 2021-12-02 14:28:06,467 ERROR org.obolibrary.robot.IOHelper - Input ontology contains 557 triple(s) that could not be parsed: