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obophenotype / uberon

An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
http://obophenotype.github.io/uberon/
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NTR: smooth muscle longitudinal layer of colon #1929

Closed sfexova closed 3 years ago

sfexova commented 3 years ago

Preferred term label: smooth muscle longitudinal layer of colon

Synonyms

Definition (free text, please give PubMed ID) A longitudinal muscle layer of muscular coat that is part of a colon smooth muscle.

Parent term (use https://www.ebi.ac.uk/ols/ontologies/uberon) colon http://purl.obolibrary.org/obo/UBERON_0001155 intestine smooth muscle http://purl.obolibrary.org/obo/UBERON_0004221

Your nano-attribution (ORCID) 0000-0003-3440-1876

paolaroncaglia commented 3 years ago

@sfexova I created UBERON:8410061 colon smooth muscle longitudinal layer. However, it seems that UBERON:0012419 'taenia coli' (here) should be a subclass of the new term above, if not the same thing altogether. 'taenia coli' has clear textual links to colon and to longitudinal muscle layer, but no formal relationship. Are there other known instances of "longitudinal ribbons of smooth muscle" in the colon? Thanks, Paola

paolaroncaglia commented 3 years ago

@sfexova Apologies, I can't remember if you mentioned something about this ticket on our call earlier? The sound wasn't very good so I might have missed it. Thanks.

paolaroncaglia commented 3 years ago

I added the requested Uberon term already, so I'll close this ticket. There may still be room for improvement around possible links between UBERON:8410061 colon smooth muscle longitudinal layer. and UBERON:0012419 'taenia coli' but there was no follow-up, so I'll leave as is.